Bacillus pacificus: LMD38_15010
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Entry
LMD38_15010 CDS
T07947
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bpac
Bacillus pacificus
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_15010
DNA repair and recombination proteins [BR:
bpac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMD38_15010
Archaeal homologous recombinant proteins
LMD38_15010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Lipase_GDSL
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
UEP92692
LinkDB
All DBs
Position
complement(2864766..2865923)
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AA seq
385 aa
AA seq
DB search
MKLFHTADWHLGKLVHGVYMTEDQKIVLDQFVQAVEEEKPDAVIIAGDLYDRAIPPTEAV
DLLNDVLQKIVIDLQTPVIAVAGNHDSPDRIHFGSSLMKKQGLFIVGQFQFPYEPIILND
EYGEVHFHLIPYADPSIVRHVLKNEDVRSHDDAMRIFMNELSEAMDKKARHVFVGHAFVT
SAGEAEENTSDAERPLSIGGAEYVNSHYFDKFHYTALGHLHQAHFVRNETIRYSGSPLAY
SISEEKHKKGYYIVELNEQGEATIEKRLLNPRRKMRTVEAKIDELLQHPVSEDYVFVKLL
DENPVLQPMEKIRSVYPNAMHVERAIQRREFTESNEVTVSRHKMDDLSLLKAFYKEMKGL
DLSEEKERLFVEVLQTVQEREGERG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatttcatacagccgattggcatttaggaaagcttgttcatggcgtgtatatg
actgaagatcaaaagattgtactagatcagtttgtacaagctgttgaagaagaaaaacca
gatgccgtaattattgcaggggatttatatgaccgagcaattccacctacagaagcagta
gacttattaaatgatgtgctgcaaaaaatagtgattgatttacaaacaccagttattgca
gttgctgggaaccatgatagtccagatcgtattcattttggaagtagtttaatgaagaaa
caaggattatttattgtggggcaatttcaatttccatatgagccgattatattaaatgat
gaatatggggaggttcacttccatctcattccttatgcggatccaagtatagttagacat
gtattgaaaaacgaagacgtacgttctcatgatgatgcgatgcgtatttttatgaatgag
ctatctgaagcgatggataaaaaagctagacatgtgtttgttggtcatgcatttgtaact
tctgctggagaagcggaagagaatacaagtgatgctgaacgaccactttcaattggtggt
gctgaatacgtgaatagtcattattttgataaatttcattacacagcgcttggacattta
catcaagcgcatttcgtacgtaatgagacgattcgatattccggttcgccacttgcctat
tctatttctgaagaaaaacataaaaaaggatattatattgtggaactgaacgagcaaggt
gaagcaacaattgaaaaaaggttacttaatccacgccgtaaaatgcgaacagtagaagcg
aaaatagatgaattgttacaacatccagtaagtgaagattacgtgtttgtaaaattatta
gatgaaaatcctgtcttgcagccaatggaaaaaatacgctctgtttatccaaatgcaatg
catgttgaaagagccattcaaagacgagagttcacggagtcaaatgaagtaactgtttca
agacataaaatggatgatttatcattattaaaggctttttataaagaaatgaaaggctta
gatttatcagaagagaaagaacgtctatttgtagaagtattacaaacagtgcaagaacgg
gaaggtgaacgaggatga
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