Bacillus pacificus: LMD38_16820
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Entry
LMD38_16820 CDS
T07947
Name
(GenBank) SH3 domain-containing protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
bpac
Bacillus pacificus
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bpac01002
]
LMD38_16820
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpac01011
]
LMD38_16820
Peptidases and inhibitors [BR:
bpac01002
]
Cysteine peptidases
Family C40
LMD38_16820
Peptidoglycan biosynthesis and degradation proteins [BR:
bpac01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
LMD38_16820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_3
SH3_4
NLPC_P60
SH3_2
SH3_9
DUF1175
Motif
Other DBs
NCBI-ProteinID:
UEP93021
LinkDB
All DBs
Position
complement(3213668..3214948)
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AA seq
426 aa
AA seq
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MKKVIAGLAAASVAGVAVPGMDSAHAQVSNEALKEINGQTQTQTTVTETKTVETKSDLKY
TVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGGK
TGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGTG
YVSKDFVTKGGSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVT
NGTVLNVTGAENGWYKINHNGRTGYVSADFVKFVKGGVNNVTNNNNVTNNVQQPGKDVQK
PTTGGDTSSIAGFARSLNGSPYRTAGTTPAGFDCSGFIHYVLNQTGHKGARQTVAGYWSS
KTKTSNPQPGDLVYFQNTYKSGPSHMGVYLGNGQFISAETDATGVRISSVSNSYWSKHLL
GYTKAY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtaattgcaggtttagcagcagcttcagtagcaggtgttgcagttccaggt
atggattctgctcatgcacaagtttcaaacgaagcgctaaaagaaattaatggacaaact
caaacacaaacgactgtaactgaaacaaaaactgtagaaacaaaatctgacttaaaatac
acagtaactgctgatgtattaaatgttcgttcaggtgctggtacaggacatagcgttatt
tctaaagtaaaacaaggtcaagtactacaagtaattggacaagaaaacggttggttcaaa
gtaactgtaaacggtcaaactggttatgtaagtggtgacttcgtaacgactggtggtaaa
acaggaactactgttcaacaaggaactggtacttacacagtaaacgtttcttcacttaac
gtacgtacaggcccaagtacatctcatacagtattaggctctgtaaataaaggtaaaaca
gtacaagttgttggtgaagtacaagattggtttaaaatcaatttcaatggtggaactgga
tacgtaagcaaagacttcgtcacaaaaggtggttctgctgtatctaaccaaacacaacaa
ccaactacaaacaacaatactactacagttcaaactggtggttcttatgttgttaacact
ggtgctttaaaagtacgtacaggcccagctacatacaacgctgtaatcggtggtgtaaca
aacggtacagtattaaacgttactggcgctgaaaatggttggtacaaaattaaccataac
ggccgcacaggttacgtaagtgcagacttcgttaagtttgtaaaaggcggagtaaacaac
gttacaaataacaataacgttacaaataacgttcaacaaccaggtaaagacgtacaaaag
ccaacaactggtggagatacatcttcaatcgctggattcgctagatcattaaatggttca
ccatacagaacagctggtacaacacctgctggttttgattgcagtggattcattcactac
gtattaaatcaaactggtcataaaggcgctcgtcaaacagttgctggatactggagctct
aaaacaaaaactagcaatccacaaccaggtgatttagtatacttccaaaacacttataaa
tcaggtccttctcacatgggtgtttacttaggaaacggtcagttcattagtgcagaaact
gatgcaactggtgtacgtattagttctgtaagtaactcttactggagcaagcacctatta
ggttacacaaaagcatactaa
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