Bacillus pacificus: LMD38_18705
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Entry
LMD38_18705 CDS
T07947
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpac
Bacillus pacificus
Pathway
bpac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMD38_18705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_18705
Enzymes [BR:
bpac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LMD38_18705
DNA repair and recombination proteins [BR:
bpac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMD38_18705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UEP93368
LinkDB
All DBs
Position
complement(3610844..3611494)
Genome browser
AA seq
216 aa
AA seq
DB search
MKYPSHLVKQVKERSAPYQLEGFLSGQGPENPKFMLLGEAPGETEIHNGIPFSGRAGKQL
MGFLERIHVTREEVYITSAVRSRPYKWREKKERNGEIIQKKYNRTPNQGEIVAHAPLLDY
ELEKINPKLIVTLGNIGLQRLIGKDKKITDVHGQLLKQPIQKLKDMQSAEFTWSEKEYHI
FPIFHPASIFYNRSLLELIYEDLDKLEKYVIKNQKS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatccaagtcatttagtaaaacaagtgaaagaacgtagtgctccttatcagcta
gaaggctttttaagtggacaaggtcctgaaaatccaaaatttatgttgttaggagaagcg
cctggtgaaacagaaattcataatggaattccgtttagcgggagagcgggaaaacaatta
atggggtttttagaacgtattcacgttacaagggaagaagtatatattacgagcgctgtt
cggagtagaccttataaatggcgagagaaaaaagaacgaaatggtgaaatcatacaaaaa
aagtataatagaacgccaaatcaaggagaaatagttgcccatgcgcctttgttagattat
gaattagagaaaataaatccgaagcttatcgtcacgcttggcaatatcggtcttcaacgt
ttaataggaaaagataaaaaaatcacagacgtacacggacaattattaaaacagcccatt
caaaagttaaaggatatgcaaagtgcagagtttacatggtcagagaaagaatatcatatt
tttccgatatttcaccctgcttccattttttataatcgaagtttattggagcttatttat
gaggatttagataaacttgaaaaatatgtaataaaaaaccagaaaagctaa
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