Bacillus pacificus: LMD38_19250
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Entry
LMD38_19250 CDS
T07947
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bpac
Bacillus pacificus
Pathway
bpac00300
Lysine biosynthesis
bpac00470
D-Amino acid metabolism
bpac01100
Metabolic pathways
bpac01110
Biosynthesis of secondary metabolites
bpac01120
Microbial metabolism in diverse environments
bpac01230
Biosynthesis of amino acids
Module
bpac_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
bpac_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LMD38_19250 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LMD38_19250 (lysA)
Enzymes [BR:
bpac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LMD38_19250 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
SAM_BAF
Motif
Other DBs
NCBI-ProteinID:
UEP93469
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All DBs
Position
complement(3712906..3714222)
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AA seq
438 aa
AA seq
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MYLHGTSRINGQGHLEIGGCDTTQLAKQYGTPLYVYDEESIRGKCRAFHRAFKESGFSYQ
VAYASKAFLCMEMCRVAREENMSLDVVSGGELYTALQAGFPASRIHFHGNNKTDEEIVMA
LQANIGCFVVDNFLELEILHDLAVQHGKFVNILIRVTPGVEAHTHEYITTGQDDSKFGFG
VSNGQAMQAIELALQKSNYNVLGIHSHIGSQIFETAGFVRAIEVLRQFLEAVRERTNYVV
KVLNVGGGFGIRYTESDAPLTLETYVRAVTSAVREQFTVCNYPLPEIWVEPGRSIVGDAG
TTLYTVGSVKDIPGIRKYVSVDGGMTDNLRPALYNARYEAMLANRGNDENEEVVSIAGKC
CESGDMLIWDINLPKVASADLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVER
ETYENIIGNDRIRIKELV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacacggcacaagccgaatcaatgggcaaggacacttagaaattggagggtgc
gacacgacgcagctagcaaaacaatacggaacaccactttatgtatacgatgaagagtca
attcgaggaaagtgccgcgcgtttcatcgtgcttttaaagaaagtgggttctcttatcaa
gtagcatatgcaagcaaggcgttcttgtgcatggagatgtgccgagtagctcgtgaagag
aatatgtcattagatgttgtttctggaggagaattatatactgcactacaagcaggattt
ccggcatcgcgcattcattttcatggtaataataaaacagatgaagaaattgtgatggct
cttcaggcgaatattggttgttttgtcgtagataacttcttagaattagaaattttgcat
gatttagcagtgcaacatgggaaatttgtgaacatattaattcgtgtaacgcccggagta
gaggcgcacacacatgaatatattacaacaggtcaagatgattcaaaatttgggtttggc
gtgtcaaatggtcaagcgatgcaagcaattgagcttgctttacaaaaatcaaattataac
gtgttaggaattcattcacatatcggatcacaaatatttgaaacggctggctttgtgcga
gcgattgaagttcttcgtcaatttttagaagcagtgagagagcgaacaaactatgtagta
aaagtgctaaatgtagggggaggattcggaatacgctacacagagtccgatgcaccatta
actcttgagacgtatgtgcgagctgtaacaagtgcagtgagagaacaatttacagtatgt
aattatccattgccagaaatatgggttgagccaggtcgtagcattgtaggggatgctgga
acgacactttatacagtcggatctgtgaaagacattcctggtattcggaaatatgtatca
gtggatggtgggatgactgataacttaagacctgctttatataacgctcgttatgaagcg
atgttagcgaatcgagggaatgatgagaacgaggaagttgtttcgattgcagggaaatgc
tgcgagagtggagatatgttaatttgggatattaatctaccgaaagttgcttctgcggat
ttactagcaatttcttgtactggggcatacgggtactcgatggcgaataattataatcgg
attcgtagaccagctgtcgtcttcgcgaaaggtggtacatcacaaattgttgtagagcgc
gaaacatatgaaaatattattgggaacgatcgcatacgtattaaagaacttgtttaa
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