Bacillus pacificus: LMD38_21105
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Entry
LMD38_21105 CDS
T07947
Symbol
hemY
Name
(GenBank) protoporphyrinogen oxidase
KO
K00231
protoporphyrinogen/coproporphyrinogen III oxidase [EC:
1.3.3.4
1.3.3.15
]
Organism
bpac
Bacillus pacificus
Pathway
bpac00860
Porphyrin metabolism
bpac01100
Metabolic pathways
bpac01110
Biosynthesis of secondary metabolites
bpac01240
Biosynthesis of cofactors
Module
bpac_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LMD38_21105 (hemY)
Enzymes [BR:
bpac01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.3 With oxygen as acceptor
1.3.3.4 protoporphyrinogen oxidase
LMD38_21105 (hemY)
1.3.3.15 coproporphyrinogen III oxidase (coproporphyrin-forming)
LMD38_21105 (hemY)
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
NAD_binding_9
HI0933_like
Pyr_redox_2
Pyr_redox_3
DUF4988
Thi4
Motif
Other DBs
NCBI-ProteinID:
UEP93814
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Position
complement(4073226..4074647)
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AA seq
473 aa
AA seq
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MRKKVVIIGGGITGLTAMYNLQKNIHEKNLPIDTLLIEASGKLGGKIQTVRKDGFTIERG
PDSFLARKESAARLVKELGLGDELVNNQAGQSFILVNNRLHKMPNGSMMGIPTQITPFLF
SGLFSPIGKLRAGFDLLMPRSKPVSDQSLGQFFRHRLGNEVVENLIEPLLSGIYAGDIDE
MSLMSTFPQMYQIEQKHRSISLGMRTLAPKEEKAEPKKGIFQTVKTGLESIVESLEAKMH
EGTIIKGTRIEKVAKQGDGYTITLSNGKEIEADAVVVASSHKVLPSMFAQYKQFRFFRNI
PSTSVANVAMAFPKSAIQRDIDGTGFVVSRNSDYTITACTWTHKKWPHTTPEGKMLLRCY
VGRPGDEAVVEQTEEELVQLVLEDLRKTMDITEDPEFTVVSRWKEAMPQYTVGHNERMKK
LTTFMEKELPGIYLAGSSYAGSGLPDCIDQGEKAAKRVLAHLEKVMDTELIAQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgaggaaaaaagttgtgatcatcggcggaggcatcactggattaacagcaatgtataac
ttacaaaaaaatattcatgaaaaaaacttgccgattgatacattactgatagaagcatcg
ggtaaacttggcggaaaaattcaaaccgttcgaaaagatggatttacaattgagcgcgga
ccggattctttcttagcacgaaaagaaagtgcagctagattagtgaaagaattaggtctt
ggcgatgaacttgtaaataatcaggccggtcaatcatttatcctcgtaaacaatcggtta
cataaaatgccgaatggatcaatgatgggaattccaacgcaaattacgccgtttctattc
tccggcctgttctccccaattggtaaactaagagctggttttgatctattaatgccgagg
tcaaagccagtatctgaccaatcactcggacaatttttcagacatcgtcttggaaacgaa
gtggttgaaaacttaatagaaccgttactatcgggtatttatgcaggggatattgatgaa
atgagcttaatgtcaacattcccgcaaatgtatcaaattgagcagaaacatcgcagtatt
tcactcggtatgcgtacgctcgctccgaaagaagagaaagctgaaccgaaaaaaggaatc
ttccaaacagtgaaaacaggtttagaatctatcgtagaatctctcgaagcaaagatgcat
gaaggtacgataataaagggaactcgcattgaaaaagttgcaaaacagggtgatggctat
acgattactcttagtaacggaaaagaaatagaagcggacgcggtcgtagtggcaagttca
cataaagtattgccatctatgtttgcacagtacaagcagtttcgtttcttccgcaacatt
ccgtccacatcagttgcgaatgtagcaatggctttcccgaaatcagccattcagcgcgat
attgatggtacaggatttgttgtctctcgaaatagtgattatacaattacagcatgtacg
tggacgcataaaaagtggccacatacaacgccagaaggaaaaatgcttcttcgatgttac
gttggacgacctggtgatgaagcagttgtagaacaaacagaagaggaactcgttcagctc
gtactagaagacttacgaaagacgatggatattacagaagatccagagtttacagtcgta
agccgctggaaagaagcgatgccccaatatacagtaggccataacgagcgaatgaagaaa
ctcacaacatttatggagaaagagttgccaggtatatacttggcaggtagttcctacgct
ggttctggtctgccggactgtattgatcaaggtgagaaagcagcaaagcgtgtgctagct
catttggagaaagtaatggatacggaattaatcgcacagtaa
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