Bacillus pacificus: LMD38_21925
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Entry
LMD38_21925 CDS
T07947
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bpac
Bacillus pacificus
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LMD38_21925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_21925
DNA repair and recombination proteins [BR:
bpac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LMD38_21925
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GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UEP93969
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Position
4243784..4244596
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AA seq
270 aa
AA seq
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MHTVWKGALSLGLLNIGIKLYSAVKENDIKFLSLHKECLTPIKYKKFAPDCTDEEIDDKD
IVKAYEYAPHKYIIMDEKELAALQKAHEPRSIRIISFVQNDEIDSVLYDRSYFIGPTPGH
EKSYLLLKEALERTNKLGLIHIAIRKKQHLAIIRNFEDGLMLQTIHYPNEIRDITNTPNL
PSNENYPIQKQELTAAINLIHHLTNPFEQELYTDEYKEALTELIENKIEQQEKTETISPA
PNIINIMETLQASIEQAKIKRNNKTEKEAK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttgcataccgtctggaaaggtgcactttcacttggactattaaatataggaattaaacta
tatagtgccgtaaaagaaaacgatataaaatttttaagtctccataaagagtgcttgaca
cctattaaatataaaaaatttgctcctgattgtacggatgaagaaattgatgataaagat
attgtaaaagcctatgaatacgcacctcataaatacattattatggatgaaaaagaatta
gctgcgttgcaaaaagctcacgaaccacgatccattcgtattatatcttttgtccaaaat
gacgaaatcgattctgttctttatgaccgctcttattttataggccctaccccaggacat
gaaaaatcatatttgttattaaaagaagctcttgaacgtacaaataaacttgggcttatt
catattgctattagaaaaaaacaacatttagctattatccgtaactttgaagatggactt
atgttgcaaaccattcactaccctaatgaaattcgcgatataacaaatacacctaactta
ccaagtaacgaaaattatccgattcaaaaacaagaactcaccgcagcaattaatttaatc
catcaccttacaaaccctttcgaacaagagttatatacagacgaatataaagaagctctt
accgaattaatcgaaaataaaattgaacaacaggaaaaaacggaaacaatctctcctgcc
ccaaacatcatcaatattatggagacattacaggcaagtattgaacaagcaaaaataaaa
agaaacaataaaacagaaaaagaggccaaataa
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