Bacillus pacificus: LMD38_23125
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Entry
LMD38_23125 CDS
T07947
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
bpac
Bacillus pacificus
Pathway
bpac00630
Glyoxylate and dicarboxylate metabolism
bpac00680
Methane metabolism
bpac01100
Metabolic pathways
bpac01120
Microbial metabolism in diverse environments
bpac01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LMD38_23125 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
LMD38_23125 (fdhF)
Enzymes [BR:
bpac01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LMD38_23125 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_6
Fer4_2
Fer4_7
Fer4_21
Fer4_10
Fer4_8
Fer4_9
Fer4_15
Fer2
Fer4_16
Fer4_4
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
UEP94172
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All DBs
Position
complement(4470066..4473002)
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AA seq
978 aa
AA seq
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MAEQTVRVTVDGKEFSTSGEKTILQLFNESNLEHPQICHVPEVDPIQTCDTCIVEVNGKL
MRACSTKLENGMHIERQSQRAKEAQTEAMDRILENHLLYCTVCDNNNGNCKVHNTVHMMG
IEEQKYPYEPKVSACEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETISIDWSLDRPR
VIWDNGVSINDSSCVSCGQCVTVCPCNALMEKSMLGEAGFMTGLKPDVLDPMIDFVKDVE
PGYSSILAVSEVEAAMRKTKVNKTKTVCTFCGVGCSFEVWTKDRHILKVQPVSDAPVNGI
STCVKGKFGWDFVNSEDRITKPLIRQGDMFVEASWEEALEVVASNMQHIKSEYGSDAFGF
ISSSKVTNEENYLMQKLARQIYGTNNVDNCSRYCQSPATDGLFKTVGMGGDAGTVKDIAE
AGLVIIVGANPTEGHPVLATRVKRAHKLHEQKLIVADLRKHEMAERADLFIHPRQGTDYV
WLAGITKYIIDQDWHDKKFIAENVKNFDEYSTMLEKYTLDYTEEIAGISKENLKEMARMV
YEADGTCILWGMGVTQNTGGSTTSAAISNLLLVTGNYRRPGAGAYPLRGHNNVQGACDMA
TLPNWLPGYQAVSDDTLRAKFEKAYGTTIPKAPGLNNIAMLLAAEEGKLRGMYVMGEEMA
LVDSNANHVQHILANLDFLVVQDMFLSKTARFADVILPAAPSLEKEGTFTNTERRIQRLY
EVLKPLGDSKPDWWILQKVARALGGDWNYESPSEIMDEIASLAPLYSQATYDRLEGWNSL
CWGSHDGSDTPLLYVDGFNFPDKLARLSLDEWVPPVVAPDEYDLLLNNGRMLEHFHEGNM
TNKSAGILSKVSEVFVEISPELAIERNVKDGGLVELASPFGKIKVQALITDRVTGKELYL
PMHATINEEAINILTGTATDLYTCTPAYKQTMVKMRVLREKGNRPLPSSNPRDKKRNPQN
GVEIEQKWQRKQYVSLVD
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacagacagtccgtgtaaccgtggatggtaaagaattttccacatcgggtgaa
aagacgatactacaattatttaacgagagtaatttggaacatcctcaaatttgtcatgta
ccagaagtagatccaattcaaacttgtgatacgtgtattgtagaagtaaatggaaagtta
atgcgtgcttgttcaacgaaattagagaacggtatgcatatcgaaagacagtcccagcgt
gccaaagaggcgcagactgaggcgatggatcgaatattagagaatcatttattgtattgt
accgtgtgtgataacaataatggtaattgtaaagtccataacaccgtacatatgatggga
attgaagaacagaaatatccgtatgagccgaaagtaagtgcttgtgaagtggatatgtca
catccgttttatcggtatgatccaaatcaatgtattgcttgtggacagtgtgtagaagta
tgtcaaaacttacaagttaatgaaactatatcgatagactggagcttagatcgtccgcgt
gttatatgggataatggtgtaagtataaatgattcatcttgtgtaagttgcgggcagtgt
gtaacagtatgtccatgtaatgcgttgatggagaaatccatgttaggtgaagctggattt
atgacaggattaaaaccagatgtgttagatccgatgattgattttgtaaaggatgtagag
cctggatatagtagtattttagcggtttcagaagtagaggctgcgatgcgtaagacgaaa
gtgaataaaacaaaaacagtttgtacattttgtggtgttggttgttcattcgaagtatgg
acgaaagatcgccatatattaaaagtgcaacctgtttcagatgcaccggttaatgggatt
tccacatgtgtaaaaggtaaatttggatgggactttgtaaacagtgaagatcgaattacg
aagccattaattcgccaaggagatatgtttgttgaagcttcatgggaagaagcgttagaa
gttgttgcttctaacatgcagcatattaaatctgaatacggcagcgatgcatttggattc
atttcttcatcgaaagtaacgaatgaagaaaattaccttatgcaaaaactagctcgacaa
atatatggaacgaataatgtagacaattgttctcgttattgtcaatctccagcaacagat
ggtttatttaaaactgtcggtatgggcggcgatgcaggaacagtgaaagatatagctgaa
gcaggacttgtcattatcgttggtgcgaatccaacagaaggacaccctgtacttgcgacg
cgtgtaaaacgtgctcataaattacacgagcaaaaactgattgtagcagaccttcgtaaa
catgaaatggcagagcgtgcggatttatttattcatccgcgccaaggtacggattacgta
tggcttgctggtattacgaaatatattattgatcaagattggcatgataaaaagttcata
gctgaaaatgtgaagaactttgatgaatatagcacaatgctagaaaagtatacgcttgat
tatacagaagaaattgcggggatttcgaaagaaaacctgaaagaaatggctcgtatggta
tatgaagcagatggaacttgtatactttggggaatgggggtaacgcaaaatacaggagga
agtacaacatctgctgccatttcaaatttactgcttgttacggggaactatcgtcgtcct
ggtgcaggcgcatatccattacgaggtcataataatgtacaaggtgcttgtgatatggcg
acattaccaaactggcttccaggttatcaagcagtatcggatgatacgcttcgtgctaag
tttgaaaaagcatacggcacaacgattccgaaggcaccaggattaaataatattgcaatg
ttacttgcggcagaagaaggaaaactacgtggtatgtatgtcatgggtgaagaaatggct
ttagtcgattccaatgcgaaccatgtgcaacatattttagcgaatttagacttccttgtt
gttcaagatatgttcttatcaaaaacagctcgttttgctgatgttattttaccagcggca
ccaagcttagaaaaagaaggaacgtttacgaatacagagcgacgtattcaaagattatat
gaagtattaaaaccactgggcgattcaaaaccagattggtggattttacaaaaagttgct
cgtgcactcggcggggattggaattacgaaagtccaagtgaaattatggacgaaattgca
tcgcttgcaccgttatactctcaagcaacgtacgatcgtctagaaggatggaatagttta
tgttggggtagccatgatggtagtgatacaccgctattatatgtagacggatttaacttc
ccagataaactagctcgtttatcattagatgaatgggtaccaccagttgtagcgccagat
gagtatgatttacttttaaataatggacgtatgctagaacatttccatgaagggaatatg
acgaataagtcggctggtattttatctaaagtatctgaagtgtttgttgaaatttcacct
gaacttgctatagaacgcaatgtgaaagatggtggtcttgtagaattagcatcaccattt
ggcaaaattaaagtacaagcgcttattactgatcgtgtaacggggaaagagctatactta
ccgatgcatgcaacgataaatgaagaagcgatcaatattttaactgggacggcaacagac
ctttatacgtgtacaccggcgtacaaacaaacgatggtgaaaatgcgtgtattacgtgaa
aaaggaaatcgtccgttaccatcttcaaacccgcgagataaaaagcgtaatccgcaaaat
ggtgttgaaatcgagcaaaaatggcaaagaaaacaatacgtatcactcgtggactag
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