Bacillus pacificus: LMD38_24380
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Entry
LMD38_24380 CDS
T07947
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpac
Bacillus pacificus
Pathway
bpac03420
Nucleotide excision repair
bpac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMD38_24380 (pcrA)
03430 Mismatch repair
LMD38_24380 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_24380 (pcrA)
Enzymes [BR:
bpac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMD38_24380 (pcrA)
DNA repair and recombination proteins [BR:
bpac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMD38_24380 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LMD38_24380 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
UEP94396
LinkDB
All DBs
Position
complement(4735778..4738021)
Genome browser
AA seq
747 aa
AA seq
DB search
MSMTDRLLNGLNPQQQKAVQTTNGPLLLMAGAGSGKTRVLTHRIAYLLGEKGVAPWNVLA
ITFTNKAAREMRERIDTLVGPEAEDIWISTFHSMCVRILRRDIDRIGINRNFTILDSGDQ
LTVVKKIMKERNIDPKKFEPRSILAGISNAKNELLSADKYAKKITIADPYEKLTSDVYTE
YQKRLLKNNSLDFDDLIMTTIQLFERVPEVLEFYQRKFQYIHVDEYQDTNKAQYLLVKHL
AARFKNLCVVGDSDQSIYRWRGADISNILSFEKDYENAQVILLEQNYRSSQNILNAANAV
IERNTNRKPKKLWTDNEVGSKISYYRAATEKDEAYFVAKKIRDDIQMGKRKYTDFAVLYR
TNAQSRMVEEIFLKSNIPYKIVGGTKFYDRKEIKDILAYLRLIGNPDDEISFARIINVPK
RGIGATSIDKIINYGVQNGISLTAVFDEIEHVGVSAKVTKAVKEFAGLLHNWVNMQEYLS
VTELVEEVIEKTGYRDMLKNERTLEAEGRLENLDEFLSVTQTFESQSEDKSLVAFLTDLA
LVADIDRVDEDPTAGEEVILMTMHSAKGLEFPVVFIVGLEEGIFPHTRSLMEEDEMQEER
RLAYVGITRAEEELYLSNAQMRTLFGRTSMNAASRFITEIPTELVESLNETAPKRETSFG
AKGRTASSSKTTTTTRSRSAFARPAAKTTGGEQIGWAVGDKASHQKWGIGTVVSVKGEGD
AKELDIAFPSPIGVKRLLAKFAPVTKQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgacagatagattattaaatggtttaaatccgcagcaacaaaaagcagtacaa
acaacgaacggaccacttctattaatggcaggcgcaggtagtggtaaaacacgtgtgtta
acacatcgtattgcgtatttacttggtgaaaaaggagtagcgccatggaatgtactagct
attacctttacaaataaagcggctcgtgaaatgcgcgagcgtattgatacacttgtcgga
ccagaagctgaagatatttggatttctacgttccactctatgtgtgtacgtattttacga
cgtgatatcgatcgcattggtattaatcgtaactttacaattttagattcaggtgatcag
ttaactgtagttaaaaaaattatgaaagagcgtaatattgatccgaagaaatttgagccg
cgctctattttagctggtattagtaatgcgaaaaatgaattgttatctgcggataaatat
gcgaagaaaattacaattgctgatccatatgaaaaattaacgagcgatgtatatacagaa
tatcaaaaacgtcttttgaaaaataactcactagactttgatgatttaattatgacgacg
attcaactatttgaacgtgttccagaagtactagagttttatcagcgtaaattccagtat
attcacgtggatgagtatcaagatacgaacaaagcgcagtaccttcttgttaaacatttg
gcagcacgttttaaaaatttatgtgttgtaggtgactcagatcagtcaatttatcgctgg
cgtggtgcggacatttctaacattttgtcattcgaaaaagactatgagaatgcgcaagtt
attctgttagaacaaaattatcgttcgtcacaaaatattttaaatgcagcgaatgctgtc
attgaaagaaatacgaatcgtaaaccgaagaaattatggacagataatgaagttggaagc
aaaatctcttactatcgtgctgcaacggaaaaggacgaagcatactttgttgcgaaaaaa
attcgcgacgatattcaaatgggaaaacgaaaatatactgattttgcggtgttatatcgt
acaaatgcgcagtctcgtatggtcgaggagattttcctgaaatctaatattccttacaaa
attgtcggcggtacgaagttctacgaccgtaaagagattaaagacattttggcgtattta
cgcttaattgggaatccagatgatgagattagtttcgcacgtattattaacgtgccaaag
cgcggaattggtgcgacttctatcgataaaattattaattacggtgtacaaaatggaatt
tcattaacagctgtattcgatgagattgagcatgttggagtaagtgcaaaggttacaaag
gcagtaaaagaattcgcaggtttattacacaactgggtaaatatgcaagagtatttatct
gttacagaattggtagaagaagttattgaaaaaactggctatcgcgacatgttgaaaaac
gagcgtacgttagaagcggaaggtcgtctagagaacttagatgagtttttatctgttacg
caaacatttgaatctcaaagcgaagataagagccttgttgcattcttaacagacttagca
cttgttgcagatattgatcgtgtagatgaagacccaactgctggtgaggaagttatttta
atgacgatgcactcagcgaaagggttagaattcccagttgtctttattgttggtttagag
gagggaatattcccgcatactcgttctctaatggaagaagatgaaatgcaagaagagcgt
cgtcttgcttatgtaggtattactcgtgcagaagaagagttgtatttatcaaatgcacaa
atgcgtactttatttggtagaacaagtatgaatgccgcatcccgattcattacagaaatc
ccgacagaactagtagaatcattaaatgaaacagcgccgaagcgtgaaacttcgtttggt
gcaaaaggaagaacggcaagtagcagtaaaacgacaactacaacacgttctcgctcagct
ttcgcgcgtcctgcagctaagacgacaggcggcgaacaaatcggctgggcggtaggcgat
aaagcttcccaccaaaaatggggaatcggtacagtcgtaagtgtaaaaggtgaaggtgat
gcaaaagaattagatattgcgttcccaagcccaattggtgttaaacgtttgttagcaaaa
tttgcacctgtgacgaaacaatag
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