Bacillus pacificus: LMD38_24635
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Entry
LMD38_24635 CDS
T07947
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bpac
Bacillus pacificus
Pathway
bpac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMD38_24635 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpac03019
]
LMD38_24635 (groEL)
03110 Chaperones and folding catalysts [BR:
bpac03110
]
LMD38_24635 (groEL)
03029 Mitochondrial biogenesis [BR:
bpac03029
]
LMD38_24635 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpac04147
]
LMD38_24635 (groEL)
Enzymes [BR:
bpac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LMD38_24635 (groEL)
Messenger RNA biogenesis [BR:
bpac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LMD38_24635 (groEL)
Chaperones and folding catalysts [BR:
bpac03110
]
Heat shock proteins
HSP60 / Chaperonin
LMD38_24635 (groEL)
Mitochondrial biogenesis [BR:
bpac03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LMD38_24635 (groEL)
Exosome [BR:
bpac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LMD38_24635 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
LMD38_24635 (groEL)
Exosomal proteins of breast cancer cells
LMD38_24635 (groEL)
Exosomal proteins of colorectal cancer cells
LMD38_24635 (groEL)
Exosomal proteins of bladder cancer cells
LMD38_24635 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Cob_adeno_trans
DUF3618
Motif
Other DBs
NCBI-ProteinID:
UEP94428
LinkDB
All DBs
Position
complement(4803007..4804641)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIE
KAVVAAVEELKTISKPIEGKSSIAQVAAISAADEEVGQLIAEAMERVGNDGVITLEESKG
FTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQ
QGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVIT
EELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDR
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNV
YTKVASIVAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATG
EWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaatttagtgaagaagcacgtcgttcgatgcttcgcggtgtcgac
actcttgcaaacgcagtaaaagtaacgcttggaccaaaaggtcgtaacgttgttcttgag
aaaaaattcggttcaccacttattacaaatgacggtgtaacaatcgcaaaagaaattgaa
ttagaagatgcattcgaaaacatgggtgcgaaattagtagcagaagttgctagcaaaaca
aatgatgtagctggtgacggaacaacaactgcaactgtattagcgcaagctatgattcgt
gaaggtcttaaaaacgtaacagctggtgcgaacccaatgggtcttcgtaaaggtatcgaa
aaagctgtagttgctgcagtagaagaattaaaaacgatttctaaaccaatcgaaggtaaa
tcttctatcgcacaagtagctgctatttctgctgctgacgaagaagtaggtcaattaatc
gctgaagcaatggagcgcgttggtaacgacggcgttattactttagaagaatctaaaggt
ttcacaacagaattagacgtagtagaaggtatgcaatttgatcgtggatatgcatctcct
tacatgattactgattctgacaaaatggaagcagttcttgataacccatacatcttaatc
actgacaaaaagatttctaacattcaagaaatcttaccagtattagagcaagttgtacaa
caaggtaaaccacttcttatcattgctgaagatgtagaaggcgaagcattagctacatta
gtagtgaacaaacttcgtggtacattcaatgtagtagctgttaaagctcctggatttggt
gaccgtcgtaaagcaatgctagaagatatcgcaatcttaactggtggcgaagtaatcact
gaagaattaggccgtgacttaaaatctgctacagttgaatctttaggacgcgctggtaaa
gttgttgtaacgaaagaaaacacaactgtagttgaaggtgtaggaagcacagaacaaatc
gaagctcgcatcggtcaaatccgtgcgcaattagaagaaacaacttctgaattcgatcgt
gaaaaattacaagagcgtcttgcaaaacttgcaggtggcgtagcagtaattaaagtaggt
gcagcaactgaaactgagttaaaagagcgtaaacttcgcattgaagatgcacttaactca
actcgtgcagcagtagaagaaggtatcgttgcaggtggtggtacttcacttatgaacgta
tacacgaaagtagcttctatcgtagctgaaggcgacgaagcaacaggtattaacatcgta
cttcgtgcactagaagagccagttcgccaaatcgcaatcaacgctggtctagaaggatct
gtagttgtagagcgtctaaaaggcgaaaaagtaggcgttggtttcaacgcagctactggc
gagtgggttaacatgcttgaaactggtatcgtagatccagctaaagtaactcgctctgca
cttcaaaacgcagcatctgttgcagctatgttcttaacaactgaagctgtagtagctgac
aaaccagaaccaaatgcaccagcaatgcctgacatgggcggcatgggcatgggcggtatg
ggcggaatgatgtaa
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