Bacillus pacificus: LMD38_24920
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Entry
LMD38_24920 CDS
T07947
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
bpac
Bacillus pacificus
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
bpac03012
]
LMD38_24920 (abc-f)
Translation factors [BR:
bpac03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
LMD38_24920 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
MMR_HSR1
AAA_23
MobB
AAA_30
AAA_15
NB-ARC
AAA
AAA_7
RsgA_GTPase
AAA_13
AAA_16
nSTAND3
AAA_18
DUF87
AAA_19
FeoB_N
TrwB_AAD_bind
HEF_HK
DUF2937
Motif
Other DBs
NCBI-ProteinID:
UEP94467
LinkDB
All DBs
Position
complement(4848663..4850543)
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AA seq
626 aa
AA seq
DB search
MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAI
HIKKGTRIGHVAQIPKFDESMTVYEVLSSAFKIEKELEREMRTLEKHMAEEQESSVLQKL
MERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFHRSFLELSGGEQTKVSLAYMLLQK
PDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVKKIFDLEDGEIHVY
HTNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSM
ERALERMEKLKKPILERKQMGLQFEGQERSGKDVVVMKEVSKRFAEHLLFNEANLHVRFQ
ERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIGYLSQHAYGNMKSNVLEAFRE
CVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDECKLFEFAGNYAWARQKWEE
KLETQVIKQRRQGRKSMETVPVKKKEVRNIEEIETELMHVEEDIYTLECKMEQVVDVEML
EQLYEEKTKKELLRAELYNELENIVE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttgtagtgtaaataatgtaacgaaatcttttggtggaaacatcatatttgaa
aatatatcgcttgaaataaagaatggtgaacgtgttggattagttggtcgtaacggtagt
ggaaagacaacaatctttcagcttttaactggaatggaaagtttggatgcaggtgccatt
catataaagaaaggtacacgtattgggcatgtagcacaaattccgaaatttgatgaaagt
atgactgtatatgaagtattgagttccgcttttaaaatagaaaaggaattagaaagagaa
atgcgtactttagaaaaacatatggcggaagaacaggaatcttctgttttacaaaaatta
atggagagatacggaatcatccaagaaaagtttgcgtttcttggtggttatgaaatcgaa
gcgaacattatgaaggtagcaaatggtttacaggtgacagaactattccatcgatcattt
ctggagctaagtggtggggagcaaacaaaagtaagccttgcatacatgctgttgcagaaa
ccagatttacttttattagatgaaccaaccaatcatttagatttatttgcagtcgaatgg
ttagagcaatttttaaaagaatacaacggaacagttatggttatttcacatgatcgctat
tttcttgatgaagttgtaaagaagatttttgatttagaagatggagagattcacgtgtat
catacaaactattctcagtttgttgaggaaaaggaagaaaggttgcttcaggagtttcag
gcttatcaagaacagcaaaagaaaataaagaaaatgaaagaagcaattaagcgactacgt
gaatgggcaaatcaggcgaatcctccaaatgaaggattgcataagagagcaagaagtatg
gaacgtgcactggaacgtatggaaaaactaaagaaacctattttagaacgaaaacaaatg
ggacttcagtttgaagggcaagagagaagtggaaaagatgttgttgtaatgaaagaagtg
agtaaaagatttgcggaacatcttttatttaacgaagcaaatttacatgttcgttttcaa
gagcgtgcagctatcgttggtcgtaatggtacaggaaagacaacgctattaaagttatta
ttagaagaaatagaaccagacgctggagaaattcgaattggaagtagtgtgaaaatcggt
tatttatcccagcatgcgtacggaaatatgaagagtaatgtattggaggctttcagggaa
tgtgtagctgtaacagagggagaagcgagacatatattagctaagtttttattttatggt
ccagcggtgtttaagaaagtaacgcaactgagcggtggagaaaaaatgaggttaagactt
gcgcaacttatgtatcaagatatcaattttttaattttagatgagccaacaaatcatctc
gacattgaatcaagagaagttttagaggaagctcttgaacaatataatggaacgatttta
gctgtttcacatgatcgttattttttaaataagttatttgaaaagacgtattggattgat
gagtgtaaattatttgagtttgcagggaactatgcatgggcgcgtcaaaagtgggaggaa
aagctcgagacgcaagtgataaagcagcgacgccaaggaagaaaaagtatggaaacagtc
cctgtaaaaaagaaagaagttaggaatattgaggagattgaaaccgagttaatgcatgtt
gaagaagatatatatacgcttgagtgtaagatggaacaagtagttgatgttgaaatgctt
gaacaattgtatgaagaaaaaacgaagaaagagttgttacgagcggagttatataatgag
ttagagaatattgtggagtga
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