Bacillus pacificus: LMD38_26150
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Entry
LMD38_26150 CDS
T07947
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bpac
Bacillus pacificus
Pathway
bpac03030
DNA replication
bpac03430
Mismatch repair
bpac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMD38_26150 (dnaX)
03430 Mismatch repair
LMD38_26150 (dnaX)
03440 Homologous recombination
LMD38_26150 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpac03032
]
LMD38_26150 (dnaX)
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_26150 (dnaX)
Enzymes [BR:
bpac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMD38_26150 (dnaX)
DNA replication proteins [BR:
bpac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMD38_26150 (dnaX)
DNA repair and recombination proteins [BR:
bpac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMD38_26150 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_30
TIP49
AAA_5
AAA_19
PIF1
DnaX_C
AAA_16
Rad17
AAA_assoc_2
AAA_14
RCF1-5-like_lid
Mg_chelatase
AAA_7
AAA_18
AAA_24
TsaE
AAA_2
YgaB
nSTAND3
Sigma54_activat
DUF815
AAA_28
RNA_helicase
DUF6968
Motif
Other DBs
NCBI-ProteinID:
UEP94672
LinkDB
All DBs
Position
complement(5068062..5069750)
Genome browser
AA seq
562 aa
AA seq
DB search
MSYQALYRTWRPQKFEDVVGQKHVTKTLQNALLQEKVSHAYLFSGPRGTGKTTIAKVFAK
AINCEHAPVAEPCNECPSCLGITQGSISDVLEIDAASNNGVDEIRDIRDKVKYAPSAVEY
KVYIIDEVHMLSMGAFNALLKTLEEPPGHVIFILATTEPHKIPPTIISRCQRFEFRKISV
NDIVERLSTVVNNEGTQVEDEALQIVARAAEGGMRDALSLIDQAISYSDETVTTEDVLAV
TGSVSQQYLGNLVECIRENDVSRALRIIDEMMGKGKDPVRFMEDFIYYYRDMLLYQTSPQ
LEHMLERVMVDEQFRTLSEEMQPEVIYEIIHTLSKAQQEMKWTNHPRIFLEVVMVQLCQQ
FMMQANGADRLQAIMNRMQQLEKELEQVKKNGVPAGVQQEVRETRAAPKPVRTGSMKIPV
GRVNEVLKQAKRQDLEQLKAVWGELLGRLKAYNKVAFAVLLENSEPVAASDDTYVLAFRY
EIHCKMASENREAMDTVEQTLFELLSKRLNMIAIPKSEWGKIREDFLQREGGSSEESPEK
KEDPLIEEAVKLVGQELIEIKE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgtcataccaagcgttataccgaacatggagaccgcaaaagtttgaagatgtagtcggt
caaaagcacgtgacaaaaacgttgcaaaatgcccttcttcaagagaaagtttcacatgct
tatttattttctgggccgaggggaacaggaaaaacgacaattgcaaaagtgtttgcaaaa
gcaattaactgtgaacatgctccggtagctgaaccttgtaatgaatgtccttcttgtttg
gggattacacaaggatctatttcagatgtattagaaattgatgcggcttcaaataacggt
gtagatgaaattcgagatattagagataaagtaaaatatgctccaagtgctgtagaatat
aaagtatacattattgatgaagttcacatgctttccatgggtgccttcaatgcgctttta
aaaacgttagaagagccgccaggacatgttatctttattttagcgacaacggaaccgcat
aagataccgcctacaattatttcgcgttgccaacgtttcgaatttcgaaagatatcagta
aatgatattgttgagagattatcgacagttgtgaacaatgaaggtacgcaagtagaagat
gaggcattacaaattgttgcacgtgccgctgaaggtggtatgcgtgatgcgctcagtctt
attgatcaggcaatatcttatagtgatgagaccgttacgacagaagatgtattagctgta
acagggtctgtttctcagcaatacttaggcaacttagtagaatgtatacgtgaaaatgat
gtatcaagagcattacgtatcatagatgagatgatgggtaaagggaaagatccagttcgc
tttatggaagatttcatttactattatcgtgatatgcttttatatcaaacttcaccacaa
ttggaacatatgttggaacgagtaatggtagatgagcaattccggacgttaagtgaagaa
atgcaaccggaagtaatctatgagatcattcatactcttagtaaagcacaacaggaaatg
aagtggacaaatcatccgcgaattttcttagaagttgttatggtacaactgtgtcaacag
tttatgatgcaagcaaatggtgcagatcgtttacaagcaattatgaacaggatgcagcaa
ttggagaaagagttagaacaagtcaaaaagaatggtgtgccggccggtgtgcagcaggaa
gtcagagagacgcgtgcagcaccaaagccagtacggacagggagtatgaagatacctgtc
ggacgcgtaaatgaagtattaaagcaagcgaagcgtcaagatttagaacaattaaaagct
gtatggggagagttgttaggaagactcaaagcatacaacaaagtagcgtttgctgttttg
ttagaaaatagcgaaccggtagcggcttcagatgatacttacgttttagcgttccgatat
gagattcactgtaaaatggcaagcgaaaatcgagaggctatggatacagtggaacaaact
ttatttgaattgctaagtaaaagattaaatatgattgccattccaaaaagtgaatggggt
aaaatccgtgaagattttttacagcgtgaaggtggaagttctgaagaaagcccagagaaa
aaagaagatcctcttatagaagaggctgtaaaattagtagggcaagaactcattgaaata
aaagagtaa
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