Bradyrhizobium pachyrhizi: QA639_00175
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Entry
QA639_00175 CDS
T09303
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bpah
Bradyrhizobium pachyrhizi
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpah03016
]
QA639_00175 (miaB)
Enzymes [BR:
bpah01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
QA639_00175 (miaB)
Transfer RNA biogenesis [BR:
bpah03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
QA639_00175 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WFU56009
LinkDB
All DBs
Position
40134..41522
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AA seq
462 aa
AA seq
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MTTPRKLHIKSYGCQMNVYDAQRMADTLAGEGFVETASAEDADLVILNTCHIREKASEKV
YSELGRLRVAKDEAARAGREMKIAVAGCVAQAEGAEIIHRAPTVDIVVGPQSYHHLPELL
KRAKANGRALETEFPVEDKFGFLPQPKPDAIRARGISAFVTVQEGCDKFCTFCVVPYTRG
AEVSRPVARIIDDVKQLADNGVREFTLIGQNVNAYHGEGPDGRVWPLGKLLQRLATISGV
TRLRYSTSHPRDVDDTLIAAHRDLPELMPFVHLPVQSGADRILAAMNRKHTADDYRRVID
RFRAARQDIAFSSDFIVGFPGETAEEFSATLALVTQIGYAAAYSFKYSPRPGTPAAEMRE
TVSAAEMDERLGRLQELIDSQQSAFNRAAIGTTVDVLFERAARNPGQIVGRTAYLQPAHV
MASPDIVGQVLPVRIDSLERYSLIGELATRPAPGLISQTIGA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccgcgcaagctgcacatcaagtcctatggctgccagatgaatgtctacgat
gcgcaacgcatggcggacacgctggccggcgagggctttgtcgagaccgcgagcgccgaa
gacgccgacctcgtgatcctcaacacctgccacatccgcgagaaggcgtcggagaaagtc
tattccgagctcgggcggctgcgcgtcgccaaggacgaggccgcgcgggcggggcgcgag
atgaagatcgcggtcgccggctgcgtcgcgcaggccgaaggcgccgagatcatccatcgc
gcgccgaccgtcgacatcgtggtcgggccgcagagctatcatcatctgcctgagctcttg
aagcgcgccaaggcaaacggccgcgcgctggaaaccgaattcccggtcgaggacaagttc
ggcttcctgccgcagccgaagccggatgcgatccgcgcccgcggcatctccgccttcgtc
acggtgcaggaaggttgcgacaagttctgcaccttctgcgtggtgccctatacgcgcggc
gcggaagtctcgcgtccggtcgccaggatcatcgacgatgtgaaacagctcgccgacaat
ggcgtgcgcgaattcacgctgatcggacagaacgtcaacgcctatcacggcgaaggtccc
gacggccgcgtctggccgctcggcaaattgttgcagcggctggccacaatttccggcgtc
acacggctgcgctattcgaccagccatccgcgcgacgtcgacgacaccctgatcgcggca
catcgcgatttgcccgaactgatgccgttcgtgcacctgccggtgcaatcgggggcggac
cggatccttgccgccatgaaccgcaaacataccgccgatgactaccggcgcgtcatcgac
cggttccgcgccgcgcggcaagacattgctttttcatcagattttatcgtgggcttcccc
ggagagaccgcggaagaattttccgccaccctcgcgcttgtcacgcaaatcggatacgct
gcggcgtattcattcaaatattcgccacggccgggcacgccggcggcggagatgcgggag
acagtgtcagcagccgagatggacgagcgcttggggcggcttcaggaattgatcgacagc
cagcaatcggccttcaaccgggctgcgattggcacaacggtcgatgtgctgttcgagcgc
gccgcgcgcaatccgggccagatcgtcggccgcaccgcctatctgcagcccgcccatgtg
atggcatcgcctgacatcgtcggccaggtcctcccggtgaggatcgacagcctcgagcgc
tacagcctgatcggcgagctcgcgacgcgacccgcgcccggcctcatttcgcagaccatt
ggagcctga
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