Bradyrhizobium pachyrhizi: QA639_00250
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Entry
QA639_00250 CDS
T09303
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpah
Bradyrhizobium pachyrhizi
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpah03016
]
QA639_00250 (truB)
Enzymes [BR:
bpah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QA639_00250 (truB)
Transfer RNA biogenesis [BR:
bpah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QA639_00250 (truB)
Prokaryotic type
QA639_00250 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WFU56024
LinkDB
All DBs
Position
57668..58777
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AA seq
369 aa
AA seq
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MTVMTTNSAVDAKDADARDAERDAFAGQRADEARRTNNDPRQKQGRQNQQPRRDKRDVHG
WVVLDKPIGMTSTQAVAVLKRLFQAKRAGHAGTLDPLASGGLPIALGEATKTVPFVMDGR
KRYRFTVCWGEERDTDDTEGRPVRTSESRPTADSIRELLPRFTGVIEQIPPQYSAIKVQG
ERAYDLARDGETVELKPRPVEIHELTLVEHGDNGQSVFEAECGKGTYVRALARDMGRILG
CFGHICALRRTLVGPFTERDMIPLEQLEALCNRAASGEGSLADALLPVETALDDIPALAV
TRADAARLHRGQAVLLRGRDAPNTSGTVYVTVAGRLLALAEIGNGELIPKRVFNLNGLTA
GPARNNESN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgatgacgaccaacagcgctgtggacgcgaaggatgccgacgcgcgcgacgct
gagcgggatgcttttgccgggcagcgcgccgacgaagcgcgccgcaccaacaacgacccg
cgccagaagcagggcaggcagaaccagcagccgcgccgcgacaagcgcgacgtccatggc
tgggtggtgctcgacaagccgatcggcatgacctcgacgcaggcggtcgccgtgctcaag
cgcctgttccaggccaagcgcgccggccatgccggcaccctcgatccgctcgcttccggc
ggcttgccgatcgcgctgggcgaggccaccaagacggtgccgttcgtgatggacggccgc
aagcgctaccgcttcacggtgtgctggggcgaggagcgcgacaccgacgacaccgaggga
cggccggtcaggaccagcgaaagccggccgaccgccgattcgatccgggaactgttgccg
cgctttaccggggtgatcgagcagatcccgccgcaatattcggcgatcaaggtgcagggc
gagcgcgcctatgatctggcgcgcgacggcgagaccgtggaactgaagccccgcccggtc
gaaattcacgaattaacccttgtggaacatggcgataacggccagtccgtgttcgaggcc
gagtgcggcaagggaacctatgtccgggcgctggcccgcgatatgggccggattctgggc
tgttttggccatatctgcgccctgcggcggacccttgtcggtccgtttaccgagcgggac
atgattccgctggaacagttggaggctttatgcaatagagccgcgtctggcgagggcagc
ctcgccgacgcgcttttgcccgttgagaccgcgctggacgacatcccggcactggccgtc
acacgggctgatgcggcaaggctccacaggggccaggccgttttgttgcgcggacgggat
gcgcccaataccagcggcacagtctatgtcacggtggcaggccgacttctcgcgcttgcc
gaaattggcaatggcgaactcatccccaagcgcgtgttcaacctgaacggactgactgcc
ggtccggctcgcaacaatgaaagtaactga
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