Bradyrhizobium pachyrhizi: QA639_00405
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Entry
QA639_00405 CDS
T09303
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bpah
Bradyrhizobium pachyrhizi
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpah03400
]
QA639_00405 (addB)
Enzymes [BR:
bpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QA639_00405 (addB)
DNA repair and recombination proteins [BR:
bpah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QA639_00405 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
ParB_N
Motif
Other DBs
NCBI-ProteinID:
WFU56051
LinkDB
All DBs
Position
92988..96134
Genome browser
AA seq
1048 aa
AA seq
DB search
MRVFSVPVSAPFLRTVISALVDGRLVAGFEAQNDPARLANATLYLPTRRAGRLAREIFLD
VLESDAAVLPRIVALGDIDEDELAFADQSEDVGGAAPLEIPPRLGELERRLTLAHLVAAW
AKTPVSAPLVVGGPASTLQLAGDLARLMDDMVTRGVDWRALDRLVPDQLDKYWQHSLDFL
RIARDAWPSYLKEIGRIEPAARRDLLIEAEAARLTAHHAGPVIAAGSTGSMPATAKFLHV
VAKLPNGAVVLPGLDTDLDEGSWDTIGGERGDDGRFVTPPSSNHPQFAMHALLDRFGIKR
RDVESLADPAPLGREVLVSETMRPSTATAQWHDRLERPEIVARISAGMTNLTVVEAPNPE
MEALAIAVAMREARHLGKSAALVTPDRALARRVMASLTRWKLEFDDSGGDALIETPAGVF
ARLTAEAAAKGLEPPTLLALLKHPLFRLGGSHGALRRAIEVLEIALLRGTRPQAGTAGLA
RDFARFRAELIKLHGGETSSLHAMEPRARLRDNELNRAQDLIAKLQAALAPLEGMASSKP
YDFAELAARHREALIALSGDQNGVAVAFEERAGASLASAFDELLAKQQPSGLMTPLADYP
EVFQTAFADRMVRRPEAARAQLNIFGQLEARLTESDRVILGGLVEGVWPPAPRVDPWLSR
PMRYELGLDLPERRIGLSAHDFAQLLGHDEVILTHAAKVGGAPAVASRFLHRLEAVAGEA
RWRAATSAGETYVQYAAELDRPDKVEPIPQPEPRPPREARPLKMSVTAIEDWLRDPYTIY
ARYILKLDPLDPVDMPLSAADRGSAIHEALGEFTQVYADALPADTLRTLREIGSKYFAPL
MERPEARALWWPRFQRIAGWFAEWEQARRGQIEAIKAEIRGEIGIPLDDARTFILSARAD
RIERRDDGSFAILDYKTGQPPTGKQVRMGLSPQLTLEAAILREGGFADIPADSSVGDLVY
VRLSGNNPPGEQRSLELKIKTNDTPQPPDEAADSARRKLEALIRAFDDEQQAYTSLNLSM
WANRYGAYDDLARIKEWSAAGGLGIEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcttcagtgttcccgtttctgcgccgttcctgcggaccgtcatctcggcgctg
gtcgatggccggctggtcgcgggattcgaggcgcagaacgatccggcaaggctcgccaac
gccacgctgtatctgccgacccgccgcgccgggcggctggcgcgggaaatcttcctcgat
gtgctcgagtcggacgccgccgtgctgccgcgcatcgtcgcgcttggcgacatcgatgag
gacgagctcgccttcgccgaccaaagcgaggacgtcggcggcgccgcgccgctggagatt
ccgccaaggctcggcgagctcgagcgccggctgaccctggcgcatcttgtcgcggcctgg
gcgaagacgccggtgtcggcgccgctggtggtcggcgggccggcctcaacgctgcaactc
gccggcgatctggcgcggctgatggacgacatggtgacgcgcggcgtcgactggcgcgcg
ctcgaccgcctggtgccggaccagctcgacaaatattggcagcactcgctcgacttcctg
cgtatcgcgcgcgacgcctggcccagctacctcaaggagatcggccggatcgaacccgcg
gcgcggcgcgatctcctgatcgaggcggaagcggcgcggctgaccgcgcaccacgcgggc
ccggtgatcgccgccggttcgaccggttcgatgccggcgacggcgaaattcctgcacgtg
gtggcgaagctgccgaacggtgcggtggtgctgcccgggctcgacaccgatctcgacgag
ggcagctgggacacgatcggcggcgagcgcggcgacgacggcaggttcgtaacgccgccc
tcgtcgaaccatccgcaattcgcgatgcacgccttgctcgaccgcttcggcatcaagcgt
cgcgatgtcgagagccttgccgacccggcgccgctcggccgcgaggtgctggtgtcggag
acgatgcgtccctcgaccgcgacggcgcagtggcacgaccggctggaacgaccggagatc
gtggcgcggatttccgccgggatgaccaacctcaccgtggtcgaggcgcccaatccggaa
atggaggcgctggcgatcgcggtggcgatgcgcgaggcgcggcatctcggcaaatcggcc
gcgctggtgacgccggaccgcgcattggcgcgccgcgtgatggcgtcgctgacgcgctgg
aagctcgagttcgacgattccggcggcgatgcgctgatcgaaacgccggccggcgtgttc
gcccgcctgaccgcggaggctgcggccaaggggctggagccgccgacattgctcgcgctg
ctcaagcatccgctgttccggctcggcggttcgcatggcgccctgcggcgcgcgatcgag
gtgctggagatcgcgctgctgcgcggcacgcggccgcaagccgggaccgccggcctcgcc
cgcgacttcgcgcgcttccgcgccgaactgatcaagctgcacggcggcgagacctcgtcg
ctgcacgcgatggagccgcgcgcccggctgcgcgacaacgaactcaaccgggcgcaggac
ctgatcgccaagttgcaggcggcgctggcgccgctcgaaggcatggcgtcgtcaaaaccc
tatgatttcgccgagctcgccgcgcgccaccgcgaggccctgattgcgctgtccggcgat
cagaatggcgttgctgtcgcgttcgaggagcgcgccggtgcgtcgctggcgtccgcgttc
gacgagctgctcgccaagcagcagccgagcgggctgatgacgccgctcgccgactatccc
gaggtgttccagaccgcgttcgccgaccgcatggtgcggcggccggaagcggcgcgcgcg
cagctcaacatcttcggccagctcgaagcccgtctcaccgaatccgatcgcgtcatcctc
ggtggtctggtcgagggcgtctggccgccggcgccgcgggtcgatccgtggctgagccgg
ccgatgcggtacgagctcgggctcgaccttcccgagcgccgcatcggcctttccgcgcac
gactttgctcagctgctcggccatgacgaggtgatcctcacccacgccgcaaaagtcggc
ggcgcaccggcggtcgcctcgcgcttcctgcatcggctcgaagccgttgcgggcgaggcg
cgctggagggccgcgacatcggccggcgaaacttacgtgcaatatgccgccgagctcgac
cggcccgacaaggtcgagccgatcccgcagccggagccgcggccgccgcgcgaggcacgg
ccgctgaaaatgtcggtcaccgcgatcgaggactggctgcgcgatccctacacgatctat
gcgcgctatatcctcaagctcgatccgctcgaccccgtcgacatgccgctgtcggcggcc
gatcgcggctcggcgattcacgaggcgctcggcgagttcacgcaggtctatgccgacgcg
ctgcccgccgacaccctgcgcacgctgcgcgagatcggctccaaatattttgcgccgctg
atggagcggcccgaggcgcgggcgctgtggtggccgcgcttccagcgcatcgcaggatgg
tttgccgaatgggagcaggcccggcgcggccagatcgaggccatcaaggccgagatccgc
ggcgagatcggtatcccgctcgacgatgccaggaccttcatcctctcggcgcgcgccgac
cgcatcgagcggcgcgatgacggcagctttgcgatcctcgactacaagaccggccagccg
ccgaccggtaagcaggtgcgcatgggcctgtcgccgcagctgacgctggaagcggcgatc
ctgcgcgagggcggcttcgccgacatcccggccgactcctcggtcggcgacctcgtctat
gtcaggctgagcggcaacaacccgccgggcgagcagcgttcgctggagctgaagatcaag
accaacgacacgccgcagccgcccgatgaggccgccgacagcgcacggcgcaagctggag
gccctgatccgcgccttcgacgacgagcagcaggcctacacctcgctgaacctctcgatg
tgggccaaccgctacggcgcttatgacgacctcgcgcgcatcaaggaatggtccgccgcc
ggcggcctggggatcgaggaatggtga
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