Bradyrhizobium pachyrhizi: QA639_00585
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Entry
QA639_00585 CDS
T09303
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bpah
Bradyrhizobium pachyrhizi
Pathway
bpah02020
Two-component system
bpah02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QA639_00585 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QA639_00585 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpah03021
]
QA639_00585 (rpoN)
Transcription machinery [BR:
bpah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QA639_00585 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
WFU56085
LinkDB
All DBs
Position
complement(131052..132719)
Genome browser
AA seq
555 aa
AA seq
DB search
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLSAFVEEELERNPLLERAADGPEPPV
AGEPAMERPDYGDSDGSGSYGDDGDASDMAAGPGGEAGFEPGFEPGQEEWLNRDLGSRAE
IEQTLDTRLDNVFSEEPAEAAARAAQDAPPSVYTEWGGGASSDDEYNLEAFVAAELTLAD
HLAEQLAVAFSAPAQRMIGQYLIDLVDDAGYLPADLGQAAERLGASQQAVDEVVAVLQKF
DPPGVCARNLSECLAIQLRELDRYDPAMQALVEHLDLLAKRDIAGLRKLCGVDDEDITDM
IAEIRRLDPKPGLKFGAARTQTMVPDVYVRPGPDGGWHVELNSDTLPRVLVNQTYYAELS
KTIRKDGDKSYFTDCLQNATWLVRALDQRARTILKVATEIVRQQDGFFTYGVAHLRPLNL
KAVADAIQMHESTVSRVTANKYMATNRGSFELKYFFTASIASADGGEAHSAEAVRHHIKQ
LIDGEAPSAILSDDTIVERLRASGIDIARRTVAKYREAMRIPSSVQRRRDKQSMLGNALS
APASSSDRSRDTASV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacccaaagactagagttccgccagtcgcagtcgctggtgatgacgccgcag
ctgatgcaggcgatcaagctgctgcaactgtcgaacctggacctgtcggcctttgtcgag
gaagagctggagcgcaatccgctgctggagagggccgccgacggaccggagccgccggtg
gcgggcgagccggccatggagcggccggactacggcgattccgacggttccggcagctat
ggggacgatggcgacgcctccgacatggccgcaggcccgggcggcgaggccggcttcgag
cccggcttcgagcccggccaggaggaatggctgaaccgcgacctcggcagccgcgccgag
atcgagcagacgctcgatacccgcctcgacaacgtgttttccgaggagccggcggaagcg
gcggcgcgcgccgcgcaggatgcaccgccatcggtctacaccgaatggggcggcggcgcc
tccagcgacgacgagtacaatctcgaagctttcgtggccgccgagctgacgcttgccgac
cacctcgccgaacaactcgcggtggcgttctcggcgccggcgcagcgcatgatcgggcag
tatctgatcgacctggtcgacgacgccggctacctgccggccgatctcggccaggccgcc
gagcggctcggtgcgtcgcagcaagcggtcgacgaggtcgtcgccgtgctgcagaaattc
gatccgccgggcgtgtgcgcgcgaaacctgagcgaatgcctggcgatccagctgcgcgag
ctcgaccgctacgatcccgcgatgcaggcgctggtcgagcatctcgacctgctcgccaag
cgtgacattgcaggcctgcgaaagctctgcggcgtcgacgacgaagacatcaccgacatg
atcgccgagatccgccggctcgacccgaagcccggactgaagttcggcgccgcgcggacg
caaaccatggtgcccgacgtctatgtacgtccgggtcccgacggcggctggcatgtcgag
ctcaacagcgacactctgccgcgcgtgctggtcaaccagacctattacgctgagctgtcg
aagacgatccgcaaggacggtgacaagtcgtacttcaccgattgcctgcagaatgcgacc
tggctggtccgcgcgctcgatcagcgcgcccgcaccatcctgaaggtcgcgaccgaaatc
gtccgccagcaggatggcttcttcacttatggcgtcgcgcatttgcggccgctcaatctg
aaggcggtcgcggacgcgatccagatgcatgaatcgacggtgtcgcgcgtcaccgccaac
aaatatatggcgaccaatcgcggcagttttgaattgaagtattttttcaccgcctcgatc
gcgtcggccgacggcggcgaggcgcattcggccgaagcggtgcgtcatcacatcaagcaa
ttgatcgacggcgaggccccgtcggcgatcctgtccgacgacacgatcgtggaacgtttg
cgcgcctcgggcattgatatcgcccgccgtactgtcgcgaagtatcgcgaggcgatgcgg
ataccatcctcggtgcagcgccgccgtgacaaacagagcatgctcggtaatgccctttcg
gctcctgcctcctcgtccgaccggtcgcgcgatacagcctccgtttag
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