Bradyrhizobium pachyrhizi: QA639_00605
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Entry
QA639_00605 CDS
T09303
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bpah
Bradyrhizobium pachyrhizi
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpah03016
]
QA639_00605
Enzymes [BR:
bpah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QA639_00605
Transfer RNA biogenesis [BR:
bpah03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QA639_00605
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WFU56089
LinkDB
All DBs
Position
complement(135856..136470)
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AA seq
204 aa
AA seq
DB search
MTIRLHRGDLPDLSRYTDSVAIDTETMGLHPHRDRLCVVQMSNGDGTADVIQIPKGHTDS
PNLKALLANPKITKIFHFARFDVAVLYNTFGVMPTPVYCTKIASRLSRTYTDRHGLKDLV
REVLNVELSKQQQSSDWGAQSLSEAQLTYAASDVLHLHALRDKLNVMLAREGRTDLAQAC
FDFLPARARLDLDGWEAEDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcctgcatcgcggcgacctgcccgatctgtcccgctacaccgactccgtt
gcgatcgacaccgagaccatgggattgcatccgcaccgcgaccggctctgcgtggtgcag
atgtcgaacggcgacggcaccgccgacgtgatccagattccgaagggccacaccgattcg
ccgaacctgaaggcgctgctcgccaatcccaagatcaccaagatcttccatttcgcacgg
ttcgacgtcgcggtgctctacaacacgttcggcgtgatgccgacgccggtctattgcacc
aagatcgcctcgcgcctgtcgcgcacctacaccgatcgccacggcctgaaggatctggtg
cgcgaggtgctgaacgtcgaattgtcgaagcagcagcagtcgagcgactggggcgcgcaa
agcctcagcgaggctcagctcacctacgcggcctccgacgtgctgcacctgcatgcgctg
cgcgacaagctgaatgtcatgctcgcgcgcgagggacggaccgatctcgcccaggcctgc
ttcgacttccttcccgcccgcgccaggctcgatctcgacggttgggaggccgaggacatt
ttcgcccattcatga
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