KEGG   Bradyrhizobium pachyrhizi: QA639_01030
Entry
QA639_01030       CDS       T09303                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bpah  Bradyrhizobium pachyrhizi
Pathway
bpah03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QA639_01030 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpah03021]
    QA639_01030 (rho)
   03019 Messenger RNA biogenesis [BR:bpah03019]
    QA639_01030 (rho)
Transcription machinery [BR:bpah03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     QA639_01030 (rho)
Messenger RNA biogenesis [BR:bpah03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     QA639_01030 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 NACHT S1CSD-TOTE-2 AAA
Other DBs
NCBI-ProteinID: WFU56165
LinkDB
Position
222395..223660
AA seq 421 aa
MREIKLQDLKSKTPAELVSFAEENGVENASTMRKQELMFAILKQLAIAETDIIGEGVVEV
LSDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRTGDTIEGHIRSPKEGERYFALLKVN
TLNFEDPEKSKHKVNFDNLTPLFPNQRFRMELEDSTKKDLSARVIDIVAPIGKGQRALIV
APPRTGKTVLMQNIAHSITANHPDCYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELILDRKVSDKRTFPA
IDIARSGTRKEELITDPQVLKKMYVLRRILNPMGTMDAIDFLLDKLRNTKSNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgggaaatcaaactccaggacctcaaatcgaaaacgccggccgagctcgtctcgttc
gcggaagagaatggggtcgagaatgccagcaccatgcgcaagcaggagctgatgttcgca
attctcaagcagctcgcgatcgccgagaccgacattatcggtgagggcgttgtcgaggtg
ctgtccgacggctttggcttccttcgttcgcctgacgcgaactacctgcccggccccgac
gacatctacgtttcgccgtcgcagatccgccgtttcggcctgcgtaccggcgatacgatc
gaaggccatatccgcagcccgaaggaaggcgaacgctatttcgcgctgctgaaggtcaac
acgctcaatttcgaagacccggagaagtcgaagcacaaggtcaatttcgacaacctcacg
ccgctgtttcccaatcagcgtttccgcatggagcttgaggattccaccaagaaggacctt
tccgcccgtgtgatcgatatcgtcgcgccgatcggcaagggccagcgcgcgctgatcgtg
gcgccaccgcgcaccggcaagacggtgctgatgcagaacatcgcgcactccatcaccgcc
aatcatcccgactgctatctgatcgtgcttctgatcgacgagcgtccggaagaagtcacg
gacatgcagcgctcggtgaagggcgaggtggtgtcgtcgaccttcgacgagccggcggtg
cgtcacgtccaggtcgccgagatggtgatcgagaaggccaagcgcctcgtcgagcacggc
cgcgacgtcgtgatcctgctcgattcgatcacgcgcctcggccgcgcctacaacaccgtc
gtgccgtcatccggcaaggtgctgaccggcggtgtcgacgccaatgcgctgcagcgtccg
aagcgcttcttcggcgccgcgcgcaacatcgaggagggcggttcgctgaccattatcgcg
accgcgctggtcgataccggcagccgtatggacgaagtcatcttcgaagagttcaagggc
accggtaactccgaactgatcctcgaccgcaaggtttcggacaagcggaccttcccggcg
atcgatattgcccgttccggcacccgcaaggaggagctgataaccgatccgcaggtgctc
aagaagatgtacgtcctgcgccgcatcctcaatccgatgggcaccatggacgccatcgac
ttcctgctcgacaagctccgcaacacgaagagcaactcggaattcttcgattccatgaac
acctga

DBGET integrated database retrieval system