Bradyrhizobium pachyrhizi: QA639_02075
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Entry
QA639_02075 CDS
T09303
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bpah
Bradyrhizobium pachyrhizi
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpah03016
]
QA639_02075 (thpR)
Enzymes [BR:
bpah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QA639_02075 (thpR)
Transfer RNA biogenesis [BR:
bpah03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QA639_02075 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
WFU56351
LinkDB
All DBs
Position
442025..442561
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AA seq
178 aa
AA seq
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MPRLFTGLEIPADIGQTLSSLRGGLPGARWIDPENYHVTLRFIGDIDGMWANEIATMLFR
VNRKPFEVKLQGLSSFGGRKPRAVVAAVEPSRPLIELQAELERMMQRMGLNPEGRKFTPH
VTLARLHDASSQDVADYLSVRGYFPSRTFMADRFVLFSSRASTGGGPYVVEDSYDLCA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtctgttcactggactggaaattccggccgacatcggccaaaccctctccagc
ttgcgtggcggccttcccggcgcacgctggatcgatcccgaaaattatcacgtcactctg
cgcttcatcggcgatatcgatggcatgtgggccaacgagatcgcgacgatgctgtttcgg
gtaaaccgcaagccgttcgaggtcaaattgcagggcctgtcgagcttcggcggacgcaag
ccgcgcgcggtggttgccgccgtcgagccgagccggccgttgatcgaactgcaggccgag
ctcgagcggatgatgcagcggatggggctcaatcccgagggcagaaaattcacgccacat
gtcacgctcgcgcgtttgcatgacgcttcgagccaggacgtcgcggattatctgtccgtg
cgcggctacttcccgagccgcaccttcatggcagaccgcttcgtgctgttctcgtcgcgc
gcgtcgaccggcggcggaccctatgtggtcgaggattcctacgacctctgcgcgtaa
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