Bradyrhizobium pachyrhizi: QA639_02970
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Entry
QA639_02970 CDS
T09303
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bpah
Bradyrhizobium pachyrhizi
Pathway
bpah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QA639_02970 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpah03019
]
QA639_02970 (recQ)
03400 DNA repair and recombination proteins [BR:
bpah03400
]
QA639_02970 (recQ)
Enzymes [BR:
bpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QA639_02970 (recQ)
Messenger RNA biogenesis [BR:
bpah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QA639_02970 (recQ)
DNA repair and recombination proteins [BR:
bpah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QA639_02970 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
WFU56514
LinkDB
All DBs
Position
complement(655713..657581)
Genome browser
AA seq
622 aa
AA seq
DB search
MTAQPALDRASGPSRDALSVLSSVFGLSGFRGAQENIIRHVTDGGNCLVLMPTGGGKSLC
YQLPSLLRDGCGIVVSPLIALMRDQVAGLTEAGVNAAVLNSTLSYEEASEVERRLLAGDL
DLLYVAPERLLTPRCLNLLGQAQIALFAIDEAHCVSQWGHDFRPEYIGLSALAERFPKVP
RIALTATADALTRREIAERLQLADAPQFVASFDRPNIRYEIVDKQNATTQLKNFIKERHA
GDAGVVYCLSRAKVEDVAAALSEAGIPALPYHAGLDAGVRARHQDRFLNEDGLVIVATIA
FGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDES
TGSDAFKRVSVGKLDALVALAETVHCRRQRLLGYFGETRAEETCGNCDNCLTPPRVSDGK
VLAQKLLSCVYRTGQRFGAMHLIDVLVGRLTERVKQFNHDQLSVFGIGRELNEKQWRAVL
RQLVAMGHLRADSDAFGALVLTDSARGVLKGETAVMLREQPEGARNRAVRGKSRRGELAP
AADSPGGVANPALHAALRAWRSDVARQRGVPAYVVLHDSTIDGIAAMRPDTLGELRNIAG
IGDKKLEHYGDELIRIVKSTDG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccagcccgccctcgatcgcgcatccggcccgtctcgcgatgcgctgtccgtg
ctcagttccgtgttcggcctgtcgggcttccgcggcgcgcaggaaaacatcatccgccac
gtcaccgatggcggcaattgcctggtgctgatgccgaccggcggcggcaagtcgctgtgc
tatcagctgccgtcgctgctgcgcgacggatgcggcatcgtggtatcgcctttgatcgcg
ctgatgcgcgaccaggtcgcgggcctcactgaagccggcgtcaacgccgctgtgctgaac
tcgacgctatcctatgaagaagcctccgaggtcgagcggcggctgctcgcgggcgatctc
gatctgctctatgtggcgccggagcggctgctgacgccgcgctgcctcaatttgcttggc
caggcgcagatcgcgctgtttgcgatcgacgaggcgcattgcgtctcgcaatggggccat
gacttccgcccggaatatatcggcctgtccgcactcgccgagcgcttccccaaggtgccg
cgcatcgcgctgaccgcgaccgcggacgcgctgacccgaagggagatcgccgagcggctg
cagcttgccgacgcaccgcaattcgtcgcgagcttcgaccggcccaatatccgctacgag
atcgtcgacaagcagaatgccaccacgcagctgaagaacttcatcaaggagcggcatgcc
ggcgacgccggcgtggtctattgcctgtcccgcgccaaggtcgaggacgtcgcggcggcc
ctcagcgaggccggcattccggcgctgccctatcatgccgggctcgatgccggcgtgcgc
gcccggcatcaggaccgcttcctcaacgaggacgggctcgtgatcgtcgccacgatcgcc
ttcggcatgggcatcgacaagcccgatgtgcgcttcgtcgcgcatctcgatctgccgaag
agcatcgaggcctactaccaggagaccggacgtgccggccgcgacggcaagccgtcggcg
gcatggatggcctatggcctgtccgacatcgtgcagcagcgccgcatgatcgatgaatcg
accggctccgacgccttcaagcgcgtctcggtcggcaagctcgacgcgctggttgcgcta
gctgaaacggtgcattgccgccggcagcgcctgctcggctatttcggcgagacccgcgcg
gaggaaacctgcggcaattgcgacaactgcctgacgccgccgcgcgtcagcgacggcaag
gtgctcgcacaaaagctactgtcctgcgtctaccgcaccgggcaacgtttcggcgccatg
cacctgatcgacgtgctggtcgggcggctcaccgaacgggtcaagcagttcaaccacgac
cagctgtcggtgttcggcatcggccgcgagctcaacgagaagcaatggcgcgcggtgctg
cgccagctggtggcgatgggccatctgcgcgccgacagcgacgccttcggcgcgcttgtt
ctgaccgacagcgcccgcggcgtgctgaagggcgagaccgcggtgatgctgcgcgagcag
ccggaaggcgcgcgcaaccgcgcagtccgcggcaagtcgcgccgcggcgagctcgcgccc
gcggccgacagtccgggtggcgtcgcaaatcccgcgttgcatgcggcgttgcgcgcctgg
cgctcggacgtcgcgcgccagcgcggcgtgccggcctatgtggtgctgcacgattccacc
atcgacggcatcgccgcgatgcggccggacacgctgggcgagctacgcaacatcgcaggg
atcggcgacaagaagctcgagcattacggcgacgagctgatccgcattgtgaaatccacc
gacggctga
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