Bradyrhizobium pachyrhizi: QA639_10540
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Entry
QA639_10540 CDS
T09303
Name
(GenBank) LysR family transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
bpah
Bradyrhizobium pachyrhizi
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpah03000
]
QA639_10540
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bpah01504
]
QA639_10540
Transcription factors [BR:
bpah03000
]
Prokaryotic type
Helix-turn-helix
LysR family
QA639_10540
Antimicrobial resistance genes [BR:
bpah01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
QA639_10540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WFU57902
LinkDB
All DBs
Position
2302861..2303769
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AA seq
302 aa
AA seq
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MDRIDLFRIFARVVECASFTRAADTLRLPRSSVSSAVAELEQRVGARLLHRTTRKASPTH
DGAAFYERALRVVADVEEAETLFRHAAAEPSGRLRVDVPGRIGRLIIAPALPAFLDRYPQ
IDIDLGVTDRAINLIEDSADCVVRVGLLSEPGLIARPLGDLTLINVASPGYLARHGAPRT
PDDLGTHWAVNYASPSTGRIEEWEWCEQGATRTVAMRGRVTVNSAEAYIACCLAGLGLIQ
IPAYDVKRHIDAGELVELMPRHRAAPMPMTLLYPHRQHLSRRLQVFADWLTDLLKQKLLA
AE
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
ttggaccgcatcgacctgttccgcatcttcgctcgcgtcgtcgagtgcgcgagttttacg
cgggcagccgatacgctgcgcctgccgcgctcgtcggtctcgtcagcggtcgcggaactg
gagcagcgcgtcggcgcgcggctgctccatcgcacgacgcgaaaggcgtcgcccacgcat
gacggcgcggccttctacgaacgagccttgcgcgtcgttgccgatgtcgaggaagccgag
accctgttccgccacgccgccgccgaaccgtccggcaggctcagggtcgacgtgcccggg
cggatcggccgcctgatcatcgcgccggcgttgccggctttccttgatcgctatccgcag
atcgacatcgatctcggcgtcaccgatcgcgccatcaacctgatcgaggattccgccgat
tgcgtcgtgcgcgtcggcctgctcagcgaacccggtctgatcgcgcggccgctcggcgat
ctgacgctgatcaatgtcgcaagccccggatatctcgcgcgccacggcgcgccgcgaacg
cccgacgatctcggcacgcattgggcggtcaactacgcgtcgccctccaccggccgcatc
gaggaatgggagtggtgcgagcagggcgcaacgcgcacggtcgcgatgcgcggccgcgtc
accgtcaacagcgccgaggcctatatcgcctgctgcctcgccggcctcggcctgatccag
attcccgcctacgacgtgaagcggcatatcgatgccggagagctcgttgagctgatgccg
cggcaccgcgccgcgccgatgccgatgaccttgctctatccgcaccgtcagcatctatcg
cggcggctgcaggtgtttgccgactggctgacggatttgctgaaacagaagctgctcgcg
gcggagtaa
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