Bradyrhizobium pachyrhizi: QA639_16245
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Entry
QA639_16245 CDS
T09303
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bpah
Bradyrhizobium pachyrhizi
Pathway
bpah00521
Streptomycin biosynthesis
bpah00523
Polyketide sugar unit biosynthesis
bpah00525
Acarbose and validamycin biosynthesis
bpah00541
Biosynthesis of various nucleotide sugars
bpah01100
Metabolic pathways
bpah01110
Biosynthesis of secondary metabolites
bpah01250
Biosynthesis of nucleotide sugars
Module
bpah_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QA639_16245 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QA639_16245 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
QA639_16245 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QA639_16245 (rfbB)
00525 Acarbose and validamycin biosynthesis
QA639_16245 (rfbB)
Enzymes [BR:
bpah01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
QA639_16245 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
Gp_dh_N
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
WFU58963
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Position
complement(3548979..3550046)
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AA seq
355 aa
AA seq
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MRFKGSTIFVTGGAGFIGSAVVRHLLRDTHARVVNIDKLTYAANLASLPRAAESLNYTFE
KACICEAQNLRRLFEKYQPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTILQETLRHW
RSLSPEKRDRFRFLHISTDEVFGSLGDEGLFTETTAYAPNSPYSASKASSDHLVRAWRET
YELPTLVTNCSNNYGPYHFPEKLIPHMIIKGLAGEPLPVYGDGKNIRDWLFVEDHAKALT
LVLERGEIGETYNVGGRNERTNLHVVESICDLLDEVVPAAAGPRRQLINFVADRPGHDRR
YAIDATKLETELGWRAEENFETGIAKTVRWYVDEQPWWRAILEGGYKVERVGLNQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttaagggatcgacgatcttcgtcaccggcggcgccggcttcatcggctccgcc
gtggtccgccacctgctgcgagacacccacgcccgcgtcgtcaatatcgacaagctgacc
tatgcggcaaacctggcctcgctgccccgcgccgccgaaagcctgaactacactttcgag
aaggcatgcatctgcgaggcgcagaacctgcgtcggctgttcgagaaatatcagcccgat
gcggtgatgaaccttgccgcggaaagccatgtcgaccgctcgatcgacggccccggcgaa
ttcatccagaccaacatcgtcggcaccttcacgatcctgcaggagacgctgcgtcactgg
cgttcgctctcgcccgagaagcgcgaccgcttccgcttcctgcatatctcgaccgacgag
gtgttcgggtcgctcggcgacgaagggctgttcaccgagaccacggcgtatgcgccgaac
tcgccctattcggccagcaaggcgtcgtccgatcatttggtgcgggcctggcgcgagacc
tacgagctgccgaccctggtgaccaactgctccaacaattacggcccctatcacttcccg
gaaaagctgatcccgcacatgatcatcaaggggctcgccggcgagccgctgccggtctat
ggcgacggcaagaacattcgcgactggctgttcgtcgaggatcacgccaaggcgctgacg
ctggtgctggagcgcggcgagatcggcgagacctacaatgtcggcggccgcaacgagcgc
accaacctgcacgtggtcgagagcatctgcgacctgctcgacgaggtcgtgccggccgcg
gcaggcccgcgccgccagctgatcaatttcgtcgcagaccgccccggccacgaccgccgc
tacgccatcgacgccaccaagctcgagaccgagctcggctggcgcgccgaggagaatttc
gagaccggcatcgccaagaccgtgcgctggtatgtcgacgagcaaccctggtggcgcgcc
atcctggagggcggctacaaggtggagcgcgtcggcctgaaccagtag
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