Bradyrhizobium pachyrhizi: QA639_17340
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Entry
QA639_17340 CDS
T09303
Name
(GenBank) DUF5801 repeats-in-toxin domain-containing protein
Organism
bpah
Bradyrhizobium pachyrhizi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5801
Motif
Other DBs
NCBI-ProteinID:
WFU59167
LinkDB
All DBs
Position
3794434..3804120
Genome browser
AA seq
3228 aa
AA seq
DB search
MQGSFQVAQATGTGNSTNSAPVRIYKLTKPLTDQAVVVNLGYDQKVKVDFSSIANEKITL
VHVGEKLIILFDNQSTVTVEPFFDSRADGLKNVTIEMAPGREVSVQEFASLFPITTDASV
LPAADNGGNSNGNAQASGADFRPFAIDPLAPVPTNVLAPQEELPNLVTPVPPTGFVLNSA
PPPIISGNPLSALIVDESFLTAATNHGVAGSGLGPAGATVASVQVSFNVTVPGGQQSLTY
ALSVTTPNEDSGLIDSATGQHVLLTVNAAGVVEGRTAISGDLVLTVSVDTAGHVTLTDLR
AVHEATPGNFNEGITLASGLITLTATVTDNNNQSASASVDVGSHLTILDDGPVAGTVTGA
TDTLVLDETRPVGSDTAGGTTPTGLASVTADFSNNFTGGSYGADGAGSTAYTLHLTGTNV
ASGLYALDPTDTNPAHFGQGAQIVLNQSGDTITGSANGTTYFTITINETTGIVTFTQVNN
IWHADPTNPDDAATLTLSSASLLQVVQTITDVDGDSVTTPISLGGGVFTIQDSGPTAGTV
IEKEGPAETLVLDESRPVGSDTPAGFAPSGLASVTADFSHDFTSGSYGSDGPGHTAYTLK
LTGSNVASGLYALDPTDTTTADGDGIGQGAQIVLNQSGNTITGSAGGTTYFTITIDPSTG
IVTFTQSNNIWHSDPKNPDDPATLTLSSPSLLQVVQTITDADGDSVSTPLDVGTRVFTIQ
DSGPTAGTVTGPTDTLVLDETRPVGTDTAGGTAPTGLDSVTADFSNNFTPGGYGSDGPGH
TTYTLNLAGANVASGLYALDATDTTTGDGDGIGQGAQILLNLVGNTITGSAGGTNYFTIT
IDPSTGIVTFTQLNNIWHSDPTNPDDAATLTLSGANLLQVVQTITDADGDSVTTPLDVGT
GVFTIQDSGPTAGAVIAAADTLVLDETRPVGTDTTGGVAPTGLDTVTADFSNNFSAGSYG
SDGAGNTAYTLKLTGVNVASGLYALDPSDTDPTHFGQGAQIVLNQSGDTITGSVGGTTYF
TITINETTGVVTFTQVNNIWHADPTNPDDAATLTLSGANLLQVVQTITDADGDSVSTPLD
VGTGVFTIQDSGPTAGTVAGPTDTLVLDETRPVGTDTAGGTSPTGLDTVTADFSNNFTGG
NYGSDGAGNTAYTLKLTGANVASGLYALDPTDTDPTHFGQGAQILLNQVGDTITGSAGGT
NYFTITIDETTGIVTFTQLNNIWHSDPTNPDDAATLTLSAANLLQVVQTITDADGDHVST
PLDLGTGVFTIQDSGPTASALSGATDTLVLDETRPVGTDTAGGTAPTGLASVTADFSNGF
AGGSYGSDGPGNSAYTLKLTGANVASGLYALDATDTTTGDGDGIGQGAQILLNQVGNTIT
GSVGGTDYFTIAIDPSTGIVTFTQLNNIWHSDPTNPDDAATLTLSRPEILQLVQTITDAD
GDSVTTSLNLGSGVFAIQDSGPTAGTVIAAADTLVLDETRPVGTDTAGGSAPSGLDTVTA
DFSNNFSAGSYGSDGPGNTTYTLKLTGANVASGLFALDATDTTTADGDGIGQGAQILLNQ
VGNTITGSVGGTNYFTITIDPTTGIVTFTQLNNIWHSDPTNPDDSATLTLSAANLLQVVQ
TITDADGDSVTTPLDVGTGVFTIQDSGPTAGTVTGPTDSLVLDETRPVGSDTAGGTAPTG
LDTVTADFSNNFTGGNYGSDGAGNTAYTLKLTGVNVASGLYALDPTDTDPTHFGQGAQIV
LNQSGDTITGSVGGTTYFTITINETTGIVTFTQVNNIWHADPTNPDDAATLTLSAANLLQ
VVQTITDADGDSVATPINVGTGVFTIQDSGPTAGTVTGPTDTLVLDETRPTGTDTAGGTA
PTGLDTVTADFSNNFTAGSYGSDGAGSTTYTLKLTGLNVASGLYALDPTDADPTHFGQGA
QIVLNQVGDTITGSANGTTYFTITINETTGIVTFTQVNNIWHSDPTNPDDAATLTLSAAN
LLQVVQTITDADGDSVATPINVGTGVFTIQDSGPTAGAVTGPTDTLVLDETRPTGTDTAG
GTAPTGLDTVTADFSNNFTAGSYGSDGAGSTTYTLKLTGLNVASGLYALDPTDKTAGDGD
GIGQGTQIVLNQVGDTITGSANGTTYFTITINETTGIVTFTQVNNIWHSDPNNPDDAATL
TLTRPELLQVVQTITDADGDSVTTPVNLGTGVFTIQDSGPTAGTVTGPTDTLVLDETRPI
GSDTAGGTAPTGLDTVTADFSNNFTGGSYGSDGAGSTTYTLKLTGANVASGLYALDPTDK
TAGDGDGIGQGAQILLNQVGNTITGSVGGTNYFTITIDPSTGIVSFTQLNNIWHSDPTNP
DDAATLTLSAANLLQVVQTITDADGDSVTTPLNLGTGVFTIQDSGPTAGTVTGPTDTLVL
DETRPVGTDTAGGTAPNGLVSVTANFSDNFTGGSYGSDGAGSTTYTLKLTGSNVASGLYA
LDATDKTAGDGDGIGQGAQILLNQSGNTITGSVGATTYFTITIDPATGIVTFTQVNNVWH
SDPNNSDDAATLTLSSANLLQVVQTIVDADGDSVSTPLDLGTGVFTIQDSGPTAPTATVS
AATIGVDETPGLQTTGGASDVLGSTAITFNGAASTVAALFSTVANKGVDTDVSAASLDNG
ALSFASTGASSILTVAGGSFGSDGAGSTTYALSVLSAASGLTLTDGTGIALSLDASGRII
GTVGNDAANPSLTGQTAFAIAIDPITGQLYVADYLSLHHNSTASPNDLLTMTAGKIGATV
TLTDADGDHVTATADISTHISFLDDGPSFGTIEHGIIADYAGMSVLGNLPVFSGADGFGA
YDFTLTGNTAPAGLTFNGQAVHYSIDALGQNLTAYIGAAPSAANNIFTLNLDDTTGHYLF
TLLQPFTETTIQNVGSSSAFGSGPSEEQILSSNTDQLAVVSGTTSGGSQGGVNGSTNGWG
VDNNNFDPNEKLLFDFTSGAIASPVGNAAFHPPANESVANYTFSNYKGGDEIHYVVTYWD
GVHAASITSVSGDFDPSTHTTVATEWSTPTAPAGLQLYTVQFTDVTGSGKVDLVGVGVSS
TTNVSEDLSFNVSTIDGDGDTASSTINININGTTTLLGTAGNDVIVAGPTNETLTGNGGD
DKFVLNLSAHEIISDFNSGDTLLLDVAGLSLPTGVSNALTAGQFTSSAVTGGTENNASAW
SESGSTNKFFFNNTTHELWYSANGTGSDKVDLAHLSTGVPAATNVHIF
NT seq
9687 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttcgtttcaggtcgctcaggcaaccggcaccggcaattccaccaattcggct
cccgtacgaatttacaagttgaccaagccgctgaccgatcaggcggtggtcgtcaatctt
ggatacgaccagaaggtgaaggtcgacttttcgtcgatcgccaatgaaaagatcacgctg
gttcacgtcggcgaaaagctgatcatcctgttcgacaaccagtcgaccgtcacggttgag
ccgttcttcgactcccgtgcggatgggctgaagaatgtcaccatcgagatggcgccgggg
cgcgaggtctcggtccaggaattcgccagtctgtttccgatcaccacggacgcctccgtg
ttgccggcggccgacaatggcggcaactcgaacggcaacgcgcaggcgagcggcgcggat
ttccgcccgttcgcgattgatccgttagctcctgtgccgaccaacgtgttggcgccgcag
gaagagttgccgaacctcgtgacccctgtgcccccgaccggcttcgtgctgaacagtgct
ccgcctccgatcatttccggcaatcccctgtcggcgctgatcgtcgacgagagcttcctg
accgcggccaccaaccatggtgtcgccggttcggggctcggacccgcaggggcaacggtc
gcgtctgtgcaggtgtcgttcaacgtcacggtgccgggcggccagcagtcgctgacctat
gcgctgtcggtcacgacaccgaacgaagattccggtctgatcgattcggcgaccggtcag
cacgtcctgctgacggtcaacgcggccggcgtcgtggaagggcgcacggcgatcagtggc
gatctggtcctcacggtctcggtcgacaccgcgggtcatgtgacgctgaccgatctgcgc
gcggttcatgaggcaacaccgggcaacttcaatgaagggatcacgctggcatcgggtctg
atcacgctgaccgccaccgtgaccgacaacaacaatcagtcggcaagtgcgagcgtcgat
gtcggctcgcatctgacgatccttgacgatggtccggtggccggcacggtgaccggcgcg
accgacacgctggtgctggacgaaacgcgtcctgtcggcagcgacaccgcaggcggcacg
acgccgaccggcctcgccagcgtgacggcggacttctccaacaatttcaccggcggcagc
tatggcgccgacggtgccggcagcactgcctacacgctgcatctcaccggcacgaacgtg
gcctcgggcctctatgcgctggatccgaccgacaccaacccggcccatttcgggcagggc
gcgcagatcgtgctgaaccagtccggtgacaccatcaccggttcggccaacggcacgacc
tacttcacgatcacgatcaacgagacgaccgggatcgtgaccttcacccaggtcaacaac
atctggcatgccgatccgaccaacccggatgatgccgcgacgctgaccctctccagcgcc
agcctgctgcaggtggtgcagaccatcactgacgtggacggcgacagcgtgacaacgccg
atcagcctcggtggcggcgtgttcacaattcaggacagcggtccgacggccggcacggtg
atcgagaaggaagggccggcggagacgctggtgctggacgagtcgcggccggttggcagc
gacacgccggccggctttgcgccgagcgggcttgccagcgtgacggcggacttctcccac
gacttcacgtcgggcagctacggcagcgacggacccggccataccgcctacacgctgaag
ctcaccggctcgaacgtggcctcgggtctctacgcgctggatccgaccgacacgaccact
gctgacggcgacggcatcggacagggcgcgcagatcgtcctcaaccagtccggcaacacc
atcaccggctcggccggcgggacgacgtatttcaccatcacgattgatccgtcgaccggg
atcgtcaccttcacgcagtcgaacaacatctggcattctgacccgaagaatccggacgat
ccggcaacgctgacgctgtcgagccccagcctgctgcaggtggtgcagaccatcaccgac
gcggatggcgacagcgtgtcgacgccgctcgatgtcggcacccgtgtgttcacgatccag
gacagcggcccgaccgccggcacggtgaccggcccgaccgacaccctggtgctggacgag
acccgtccggttggcacggacaccgcgggcggcacggcgccgaccggccttgattccgtg
acggcagacttctccaacaacttcacgcccggcggctatggcagcgacggcccgggccac
acgacctacacgctgaacctcgccggcgcgaatgtggcgtccggtctgtacgcacttgat
gcgaccgatacgaccaccggcgacggcgacggcatcgggcagggcgcgcagattctgctg
aacctggtcggcaacaccatcaccggctcggccggcggcaccaattacttcacgatcacg
atcgatccctcgaccgggatcgtgacattcacccagctcaacaatatctggcactccgac
ccaaccaatccggacgatgcggcgacgctgacgctgtctggcgccaatctgctgcaggtg
gtgcagaccatcacggacgcggacggcgacagcgtgacgacgccgctcgatgtcggcacc
ggcgtgttcacgatccaggacagcggcccgaccgccggcgcggtgatcgcggcggcggat
acgttagtgctggacgagacccgtcctgtcggcaccgacactacgggcggcgtcgcgccg
accggcctcgacaccgtcacggcggacttctccaacaacttctcggccggcagctacggc
agcgacggcgcaggcaacacggcctacacgctgaagctgaccggcgtgaacgtggcctcc
ggcctctatgcgctcgatccgagcgacaccgacccgacccacttcggccaaggtgcgcaa
atcgtgctgaaccaatccggtgacaccatcaccggttcggtcggcgggaccacctacttc
acgatcacgatcaatgaaacgacgggggtcgtgacgttcacccaggtcaacaacatctgg
cacgccgatccgaccaatccagacgatgccgcgacgctgaccctgtcgggcgcgaacctg
ctgcaggtggtgcagaccatcaccgatgcggacggcgacagcgtgtcgacgccgctcgat
gtcggcaccggcgtgttcacgatccaggatagcggcccgacggcgggcacggtggccggc
ccgaccgacacccttgtgctggacgagacgcggcctgtcggcaccgacaccgcgggcggc
acctcgccgaccggcctcgataccgtgacggcggacttctccaacaacttcaccggcggc
aattatggcagcgacggcgcgggcaacacggcctacacgctgaagctgaccggcgccaac
gtcgcctccgggctctatgcgctggatccgaccgacaccgacccgacccatttcgggcag
ggtgcgcagattctgctgaaccaggtcggtgacaccatcaccggctcggccggcggcacc
aactacttcacgatcacgatcgacgagacgaccggcattgtcacgttcacccagctcaac
aacatctggcattccgatccgaccaatccggacgatgcagcgacgctgacgctctccgcg
gccaacctgctgcaggtggtgcagaccatcaccgatgcggacggcgaccacgtgtcgacg
ccgctcgatctcggcactggtgtgttcaccatccaggacagcggcccgacggcgagcgcg
ctgtccggcgcaacggacacgctcgtgctcgacgagacgcggcctgtcggcaccgacacc
gcgggcggcacggcgccgaccggccttgccagcgtcacggcggatttctcgaacggcttc
gccggcggcagctatggcagcgatggcccgggcaattcggcctacacgctgaagctcacc
ggcgccaacgtggcgtccggcctgtacgcccttgatgcgaccgacacgaccaccggcgat
ggcgatggcattgggcagggtgcgcagattctgctgaaccaggtcggcaacacgatcacc
ggctcggtcggcggtaccgattatttcacgatcgcgatcgatccctcgaccggtatcgtg
accttcacccagctcaacaacatctggcactccgatccgaccaacccggatgacgccgcg
acgctgacgctgtcgcgtccggaaatcctgcaattggtgcagaccatcaccgatgccgac
ggcgacagcgtgacgacgtcgctcaacctcggctccggtgtgttcgcaatccaggatagc
ggtccgaccgcgggcacggtgatcgcggcggcggatacgttggttctggacgagacccgt
cccgtcggcacggatacagcgggcggctcggcgccgagcggcctcgacaccgtgacggca
gacttctcgaacaacttctcagccggcagctacggcagcgacggtccgggcaacacgacc
tacacgctgaagctcaccggcgccaacgtggcgtccggcctctttgcgctcgatgcgacc
gacacgaccactgccgacggcgatggcatcgggcagggcgcgcagattctgctgaaccag
gtcggcaacacgatcaccggctcggttggcggcaccaattacttcacgatcacgatcgat
cccacgaccggtatcgtcacctttacccagctcaacaacatctggcattccgatcccacc
aatccggacgattctgcgacgctgacgctgtcggctgccaatctgctgcaggtggtgcag
accatcaccgacgcggacggcgacagcgtgacgacgccgctcgacgtcggcaccggtgtg
ttcacgatccaggacagcggcccgaccgccggcacggtgaccggtccgactgacagcctc
gtgctggatgagacccgtcccgttggcagcgacaccgcaggcggcacagcgccgaccggg
ctcgacaccgtgacggcggacttctccaacaacttcaccggcggcaattatggcagcgat
ggtgcgggcaacacggcctacacgctgaagctgaccggcgtgaatgtggcctccggcctc
tatgcgctggatccgaccgacaccgacccgacccatttcgggcagggtgcgcagatcgtg
ctgaaccaatccggtgacaccatcaccggttcggtcggcgggaccacctacttcacgatc
acgatcaatgagacgaccgggatcgtgacgttcacccaggtcaacaacatctggcacgcc
gatccgaccaatccggacgatgccgcgacgctgaccctgtcggccgcgaacctgcttcag
gtggtgcagaccatcaccgatgcggatggcgacagcgttgcgacgccgatcaacgtcggc
accggcgtgttcacgatccaggacagcggtccgacggcgggcacggtgaccggcccgacc
gacaccttggtgctggacgagacccgtcccacaggaacggatactgccggcggcacggcg
ccgaccgggctcgacaccgtgacggcggacttctccaacaacttcaccgccggcagctac
ggcagcgatggtgctgggtcgacgacctacacgctgaagctgacgggcttgaacgtggcc
tccggcctctatgcgctggatccgaccgacgccgacccgacccatttcgggcagggtgcg
cagatcgtgctcaaccaggtcggcgacacgattaccggctcggcgaacggcacgacctac
ttcacgatcacgatcaatgagacgaccgggatcgtgacgttcacccaggtcaacaacatc
tggcactccgacccaaccaatccggacgatgccgcgacgctgacgctctcggcggccaac
ctgctgcaggtggtgcagaccatcaccgatgcggatggcgacagcgttgcgacgccgatc
aacgtcggcaccggcgtgttcacgatccaggacagcggtccgacggcgggcgcggtgacc
ggcccgaccgacaccttggtgctggacgagacccgtcccacaggaacggatactgccggc
ggcacggcgccgaccgggctcgacaccgtgacggcggacttctccaacaacttcaccgcc
ggcagctacggcagcgatggtgctgggtcgacgacctacacgctgaagctgacgggcttg
aacgtggcctccggcctctatgcgctcgatccgaccgacaagaccgccggcgacggcgac
ggcatcggacagggaacgcagatcgtgctcaaccaggtcggtgacaccatcaccggctcg
gcgaacggcacgacctacttcacgatcacgatcaatgagacgaccgggatcgtgacgttc
acccaggtcaacaacatctggcactccgatccgaacaacccggacgatgcggcgacgctg
acgctgacgcgccctgagttgctgcaggtggtgcagactatcacggacgccgatggtgat
agcgtgacgacgccggtcaatctcggcaccggcgtgttcacgatccaggacagcggcccg
acggcaggtaccgtgaccggtccgaccgacaccctcgttctggacgagacgcgtcctatt
ggcagcgacaccgccggcggcacggcgccgaccgggctcgacaccgtgacggcggacttc
tccaacaacttcaccggcggcagctacggcagcgacggtgctggcagcacgacgtacacg
ttgaagctcaccggtgcgaacgtggcctccggcctctatgcgctcgatccgaccgacaag
accgccggcgacggcgatggtatcggacagggcgcgcagattctgctgaaccaggtcggc
aacaccatcaccggctcggtcggcggcaccaactacttcacgatcacgatcgatccgtcg
accggcatcgtgagcttcacccagcttaacaatatctggcactccgatccgaccaacccg
gacgatgcggcgacgctgacgctgtcggctgccaatctgttgcaggtggtgcagaccatc
accgatgcggacggcgacagcgtgacgacgccgctgaacctcggcaccggcgtgttcacg
atccaggacagcggtccgaccgccggcacggtgaccggcccgaccgacacgctcgtgttg
gacgagacgcgtcctgttggcaccgacaccgcgggcggcacggcgccgaacgggcttgtt
tccgtgacggcgaacttctccgacaacttcaccggcggtagctatggcagcgacggtgct
ggttcgacgacctacacgctgaagctgacgggctcgaacgtggcctccggcctctatgcg
ctcgatgcgaccgacaagactgccggcgacggcgatggtatcggacagggtgcgcagatt
ctgctgaaccagtccggcaacaccatcaccggttcggttggcgcgacgacctacttcacg
atcaccattgatcccgcaaccgggatcgtgaccttcacccaggtcaacaacgtctggcac
tccgatccgaacaattcggacgatgcagcgacgctgacgctctcgagcgccaacctgctg
caggtggtgcagaccatcgtcgatgccgacggtgacagcgtgtcgacgccgctcgacctc
ggcaccggcgtgttcacaatccaggacagcggcccgacggcgccgacagcgacggtcagc
gcagctacgatcggcgtggacgagacccccggcctgcagaccaccggcggcgcgagcgac
gtgctcggctcgactgcgatcacgttcaacggtgccgccagcactgtcgccgcgctgttc
agcacggtcgcgaacaagggcgtcgacaccgatgtgtcggcagcgtcacttgacaacggt
gcgctcagctttgcctcgacgggcgcgagcagcatcctgacggtggccggaggcagcttc
ggctctgacggcgcggggtctacgacctatgcgttgagcgtcctcagcgctgcgtcaggc
ctgacgttgacggatggcacagggatcgcgctgtcgctggatgccagcggccggatcatc
ggtactgtgggcaacgatgccgccaaccccagcctgacgggccaaacggcgttcgcgatc
gccatcgatccgatcaccggtcaactctatgtggcggactatctctcgctccaccacaac
agcaccgccagtccgaacgatctgctgacgatgacggccggcaagatcggcgcgacggtg
acgttgacggacgccgatggcgatcatgtgacggccaccgccgacatcagcacccatatc
agcttcctcgacgacggcccgagtttcggcacgatcgagcatggaatcattgccgattac
gcggggatgtccgtgcttggtaacctacccgtgttctccggcgccgatggttttggcgca
tatgacttcaccttgactggaaacacggcgccggccggcctgacgttcaatggccaggcc
gtgcactattccatcgacgcacttggacagaatttgacggcctatatcggtgcggcccca
tcggcagcgaataatatcttcacgctgaatctggatgacacaaccggtcactacctattc
acattgcttcagccgttcacggagacaacgatccagaatgtcggcagttcatccgccttt
ggatcgggaccttcggaagagcagattctttcttcgaacaccgatcaactggcggttgtt
tcgggaacgacctccggcggcagccaaggcggtgtgaacggatcaaccaacggttggggc
gttgacaacaataacttcgaccccaatgaaaagctgctgttcgatttcacgagcggcgca
atcgccagtccggtcggcaacgcggcgttccatccgccggcaaacgaatcggtcgcgaac
tacacgttctccaactacaagggcggagacgaaatccattacgtcgtcacttattgggac
ggagtgcacgccgcctccatcacatcggtatccggtgatttcgatccttccacccacacc
acggtcgccaccgaatggtcgacgcccacagcgccggccggcctgcagctctacactgtc
cagttcacggacgtgacaggcagcggcaaggtcgacttggttggcgtcggagtttcgtcg
accacgaacgtctccgaggacctgagcttcaacgtgtcgacgattgacggtgacggcgac
acggcgtcgagcaccatcaatatcaacatcaatggcaccacgacccttctgggcacggcc
ggcaatgatgtcattgtcgccggaccaaccaacgagacgctcactggcaatggtggggac
gacaagtttgttctcaatctcagcgcccacgaaatcatcagcgatttcaacagcggtgat
acactccttctcgacgtggccggtctgagcctgccgacgggcgtttcaaacgcccttacg
gctggtcagttcacgtcatcggcagtcaccggcgggaccgagaacaacgccagcgcctgg
agcgaaagtggaagcacgaacaagttcttcttcaacaatacgacgcatgagctctggtac
tcggcgaatggcaccggctccgacaaggtggatctcgcacatctgagcactggcgtgccg
gcggccacgaacgttcatattttctag
DBGET
integrated database retrieval system
