Bradyrhizobium pachyrhizi: QA639_19770
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Entry
QA639_19770 CDS
T09303
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bpah
Bradyrhizobium pachyrhizi
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpah03016
]
QA639_19770 (rnd)
Enzymes [BR:
bpah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QA639_19770 (rnd)
Transfer RNA biogenesis [BR:
bpah03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QA639_19770 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
WFU59622
LinkDB
All DBs
Position
complement(4303446..4304594)
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AA seq
382 aa
AA seq
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MDLISTTSDLAAACDRLAKHKVITVDTEFLRETTYYPLLCVVQMASADEAVVVDALAPGI
DLKPFFDLMSNEAVLKVFHAARQDIEIVWHLSGTIPHPIFDTQVAAMVLGYGDSIAYDQL
VDRVTGHRPDKTHRFTDWSRRPLTDEQLHYAVSDVTHLREVFAALDADLKKRDRSDWVSE
EMEVLTSPKTYDFHPERAWERLKTRVRKPRELAVLIEVAAWREQEAQSRDVPRSRVLKDD
AVGDIATHAPTSLEKLGNLRSLPKGFERSKWGADIIAAVQRGLARDQATLPKLEKPRNNS
NGAATVELLKVLLRMTSERHGVASKVIATVDDLEQIAASDQAEVGALHGWRRELFGEAAL
KLKHGQLALAIDKGRVVRVDRS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatttgattagcacgacctccgacctcgccgccgcctgcgaccggctcgccaaacac
aaggtcatcactgtcgacaccgagttcctgcgggagacgacctactatccgctgctctgc
gtcgtgcagatggcgagcgcggacgaagcggtcgtggtcgacgcgctggcacccggcatc
gacctcaagccgttcttcgacctgatgtcgaacgaggccgtgctcaaggtattccacgcc
gcgcggcaggacatcgaaatcgtctggcacctctccggcacgatcccgcatccgatcttc
gatacccaggtcgccgccatggtgctcggctatggcgacagcatcgcctatgaccagctc
gtcgaccgcgtcaccggccaccgccccgacaagacccatcgcttcaccgactggtcgcgc
cgcccgctgaccgacgagcagctccactacgccgtctccgacgtgacccatctgcgcgaa
gtgttcgcagccctcgatgccgatctgaagaagcgcgaccgcagtgattgggtcagcgag
gagatggaggtcctgacctcgccgaagacctacgacttccatccggagcgcgcctgggag
cggctcaagacccgcgtgcgcaagccgcgcgagctcgcggtgctgatcgaggtcgcggcc
tggcgcgagcaggaggcgcagagccgcgacgtgccgcgttcgcgcgtgctcaaggacgat
gcggtcggcgatatcgccacccatgcgccgacctcgctcgagaagctcggcaatctgcgc
tcgctgccgaagggctttgagcgctcgaaatggggcgccgacatcattgccgccgtgcag
cgcgggctcgcccgcgaccaggcgacgctgcccaagctggaaaagccgagaaacaattcc
aacggtgcggcgaccgtcgaactgttgaaggtgctgctgcgcatgacgtcggagcggcac
ggcgtcgccagcaaggtgatcgccaccgtcgacgacctcgagcagatcgcggccagcgat
caggccgaggtcggcgccctgcacggctggcgccgcgaactgttcggcgaggcggcactc
aagctcaagcatggccagctcgcgctcgcgatcgacaagggccgcgtggtgcgggtggac
cggagttag
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