Bradyrhizobium pachyrhizi: QA639_21170
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Entry
QA639_21170 CDS
T09303
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpah
Bradyrhizobium pachyrhizi
Pathway
bpah03420
Nucleotide excision repair
bpah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QA639_21170
03430 Mismatch repair
QA639_21170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpah03400
]
QA639_21170
Enzymes [BR:
bpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QA639_21170
DNA repair and recombination proteins [BR:
bpah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QA639_21170
MMR (mismatch excision repair)
Other MMR factors
QA639_21170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Viral_helicase1
DUF4441
Motif
Other DBs
NCBI-ProteinID:
WFU52221
LinkDB
All DBs
Position
complement(4572883..4574463)
Genome browser
AA seq
526 aa
AA seq
DB search
MYVPSPQQAAVQQEAWNGTGSIIVIAVAGAGKSTTIVRTVGNMRGSSIILSFGAKISKEM
KGKLEQLGIDWKKAESSTCHAIALRNYRKTFPKVRIDDEKVGRISAEWVDNAKIEPSLVP
HVSVACQLVGLAKQSGLGIEGQGHIDDISIWEDIAEHFDLFDEEPLQKKAQDIIDLAILL
LKESNKNPEIIDFNDMIYLPLLYKIRFWQFDNVWIDEAQDTNTVRRLLVRALMKPGTGRV
IAVGDPHQAIFGFTGADNDSLDIIQQEFGAKVMPLTVTYRCPKNVVNFAKTWVNHIEAHP
SAPEGKISSETFEKMIGVRERLNGDAAIICRNTRPLVTAAFALIREKIPCRIEGRDIGNS
LKKLATRWKSISNIPELEDKLEDWLEKEKERWLPKKKMSKVQEAEDKVETLKVVMDACRD
DKQDSIAAVTAYIDNIFADDVKGILTLCTIHRSKGREWKRVYWLDRLNTCPSKYASMPWE
KEQEINLQYVAATRAMEELIDLYPPLPKVKVPPANDNKQSVATKAA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtcccctccccgcaacaggcggctgtccagcaagaagcctggaacggcaccggc
tcaatcatcgtgatcgcagtggccggcgccggcaagtccacgaccatcgtccgcacggtc
ggcaacatgcgcggcagcagcatcatcctgtccttcggcgccaagatctccaaggagatg
aagggcaagctggagcagctcggcatcgactggaagaaggcggagtcttcgacctgtcac
gccatcgccctgcgcaactaccgcaagacatttccgaaggtgcgcatcgacgacgagaag
gtcggccgcatcagtgccgaatgggtggacaacgccaagatcgagccgtcgctcgttccc
cacgtctcggtcgcctgccagcttgtcggcctcgccaagcagagcggcctcgggatcgag
ggccagggccacatcgacgatatctcgatctgggaggatatcgcagagcacttcgacctg
ttcgacgaagagccgctgcagaagaaggcgcaggacatcatcgacctggcgatcctgctg
ctcaaggagtcgaacaagaacccggagatcatcgacttcaacgacatgatctacctgccc
ctgctctacaagatcaggttctggcagttcgacaacgtctggatcgatgaggcgcaggac
accaacacggtgcgccggctgctggtcagggcgctgatgaagcctggcaccggccgcgtc
atcgccgtcggcgacccccaccaggccatcttcggcttcacgggcgctgacaacgacagc
ctggacatcatccagcaggagttcggcgccaaggtgatgccgctgacggtcacctaccgc
tgccccaagaacgtggtgaatttcgccaagacctgggtgaaccacatcgaggctcacccc
tcggcgcccgaaggcaagatcagctcggagacgttcgagaagatgatcggcgtccgcgag
cgtctgaacggcgacgcggcgatcatctgccgcaacacccggccgctcgtgacggcagca
ttcgccctgatccgcgagaagatcccgtgccgcatcgaaggccgggacatcggcaactcg
ctcaagaagctggccacccggtggaagtcgatcagcaacatcccggagctggaggacaag
ctggaggactggctggagaaggagaaggagcgctggctgccgaagaagaagatgtcgaag
gtccaggaggccgaggacaaggtcgagacgctgaaggtcgtcatggacgcctgccgtgac
gacaagcaggactcgatcgccgcggtcaccgcctacatcgacaacatcttcgccgacgac
gtgaagggcatcctcaccctctgcaccatccaccggtcgaaaggccgggaatggaagcgc
gtctactggctcgatcggctgaacacctgcccgtcgaagtacgccagcatgccctgggag
aaggagcaggagatcaatctgcagtacgtggccgccacccgcgccatggaagagctgatc
gatctctacccgccgttgccgaaggtgaaggtgccgccggccaacgacaacaagcaatcc
gtagcgacaaaggcggcctaa
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