Bradyrhizobium pachyrhizi: QA639_22620
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Entry
QA639_22620 CDS
T09303
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bpah
Bradyrhizobium pachyrhizi
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpah03009
]
QA639_22620 (rimO)
Enzymes [BR:
bpah01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QA639_22620 (rimO)
Ribosome biogenesis [BR:
bpah03009
]
Prokaryotic type
ribosomal protein modification factors
QA639_22620 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WFU52498
LinkDB
All DBs
Position
complement(4820648..4821973)
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AA seq
441 aa
AA seq
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MQEAAAPKVSFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLAAIGEAMAENGKVIVTGCMGAEPEQIESAYPGVLSITGPQQYESVLDAVHRALPPAH
NPHIDLVPPQGVKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPANDVLREAEKLV
KAGVKELLVISQDTSAYGVDLKYAESPWQDRSVRAKFFDLAKELGELGAWVRLQYVYPYP
HVDEVIGLMTEGKVLPYLDIPFQHASPDVLRAMKRPAAQEKTLARIQKWREQCPELTLRS
TFIVGFPGETDSDFAYLLDWLDEAGIDRLGCFKYEPVAGAASNAIGNAVPDEVKQERWNA
LMARQQKISARRLKRKVGTRQQVIIDEIGPTVAKGRSKADAPEIDGAVYLTSRRPLKVGE
IVTAKIERSDQYDLHGSVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggccgccgcgccgaaagtgagctttgtgtccttggggtgccccaaggcgctg
gtcgattccgagcgcatcatcacgcggctgcgcgcggagggctatgagctggcgcgcaag
catgacggcgccgacatcgtcatcgtcaacacctgcggctttctcgacagcgccaagcag
gaatcgctcgccgcgatcggcgaggccatggccgagaacggcaaggtcatcgtcaccggc
tgcatgggcgccgagccggagcagatcgagagcgcctatcccggcgtgctctcgatcacg
gggccgcagcaatatgagagcgtgctggacgccgtgcaccgcgcgctgccgccggcgcac
aacccgcatatcgacctggtgccgccgcagggcgtcaagctgacgccgcggcactacgcg
tatttgaagatttccgagggctgcaacaaccgctgcagcttctgcatcatcccgaagctg
cgcggcgacctggtgtcgcgaccggccaatgacgtgctgcgcgaggccgagaagctggtg
aaggccggcgtcaaggagttgctcgtcatctcgcaggacacctcggcctatggcgtcgac
ctgaaatacgccgagagcccgtggcaggaccgcagcgtccgcgcaaaattcttcgatctc
gccaaggagcttggcgagctcggcgcctgggtgcggctgcaatatgtctacccctacccg
catgtcgacgaggtcatcggcctgatgaccgagggcaaggtgctgccctatctcgacatc
ccgttccagcatgcgagcccggacgtgctgcgcgcgatgaagcgcccggctgcgcaggaa
aagacgctggcgcggatccagaaatggcgcgagcagtgccccgagctgacgctgcgctcg
accttcatcgtcggtttccccggcgagaccgattccgacttcgcctatctgctcgactgg
ctcgatgaagccggaatcgatcgcctcggctgcttcaaatacgagccggttgccggcgcc
gcgtcgaacgcgatcggaaatgccgtgcccgacgaggtcaagcaggagcgttggaatgcg
ctgatggcgcggcagcagaagatctccgcgaggcgcctgaagcgcaaggtcggcacccgc
cagcaggtcatcatcgacgagatcggccccacggtggcgaagggccggtcaaaggccgat
gcgccggagatcgacggcgccgtctacctcaccagccgccgtccgctcaaggtaggcgag
atcgtcaccgccaagatcgagcgctccgaccaatacgacctgcacggcagcgtcgccgga
ttctga
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