KEGG   Bradyrhizobium pachyrhizi: QA639_23130
Entry
QA639_23130       CDS       T09303                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
bpah  Bradyrhizobium pachyrhizi
Pathway
bpah02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    QA639_23130
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:bpah02022]
    QA639_23130
Two-component system [BR:bpah02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   QA639_23130
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 Mg_chelatase AAA_2 AAA_16 AAA MCM AAA_22 bpMoxR AAA_33 AAA_19 FleQ
Other DBs
NCBI-ProteinID: WFU52593
LinkDB
Position
complement(4924331..4925701)
AA seq 456 aa
MASDILIVDDEADIRDLVAGILDDEGFSTRTARDSDSALAEIANRRPNLVFLDIWLQGSK
LDGLQLLEQIKKDNADLPVVMISGHGNIETAVAAIKRGAYDFIEKPFKSDRLILVATRAL
ETSRLKREVKELKQLAPAASVLTGRSACMNQLRQTIDRAAKANSRILIVGPSGAGKELAA
RTLHHASGRAEGPFVVINAAAITPERMEIELFGIEGSNGEQQRKAGALEEAHGGTLFIDE
IADMPRETQNKILRVLVDQTFQRQGGTGKVHVDVRIISSTARNLEEEIAAGRFREDLYHR
LSVVPIRVPPLSERREDIPELIDYFMDQISAATGLPKRQIGQDAMAVLQSHVWPGNVRQL
RNNVERVMILAGGGPEAIITADMLPQDVGSMVPAMPTSNNGEHIMGLPLREAREVFERDY
LIAQISRFSGNISRTAEFVGMERSALHRKLKALGVG
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggcaagtgacattctgattgtcgacgacgaagctgacattcgcgacctcgttgcgggt
attctggacgatgagggcttttccacccgcaccgcgcgcgacagcgactcggcgctcgcc
gagatcgccaaccgccggcccaacctggtcttcctcgacatctggctgcagggctccaag
ctcgacggcctgcagctgctcgagcagatcaagaaggacaatgccgatctgcccgtcgtg
atgatctcgggccacggcaatatcgagaccgcggtcgccgcgatcaagcgcggcgcctac
gacttcatcgagaagccgttcaagtcggaccgtctgatcctggtcgcgacccgggcgctg
gagacctcgcggctcaagcgcgaggtgaaggagctcaagcagctggctccggcggcgagc
gtcctgaccggccgctcggcttgcatgaaccagctccgccagaccatcgaccgcgccgcc
aaggccaacagccgcatcctgatcgtcggtccctccggcgctggcaaggagcttgccgcg
cgcacgctgcaccatgcctccgggcgcgccgaggggccgttcgtggtgatcaatgcggcc
gcgatcacgccggagcgtatggagatcgagctgttcggcatcgagggatcgaacggcgag
cagcagcgtaaggccggcgcgctcgaggaggcgcatggcggcacgctgttcatcgacgag
atcgcggacatgccccgcgagacccagaacaagattctgcgtgtgctggtcgatcagacc
ttccagcgtcagggcggcaccggcaaggttcatgtcgacgtccgcatcatctcctcgacc
gcgcgcaatctcgaggaggagatcgccgcaggccgcttccgcgaggacctctatcatcgc
ctctcagtggtgccgatccgcgtaccgccgctgtcggagcgacgcgaggacatccccgag
ctgatcgactatttcatggaccagatctcggccgccaccggcctgccgaagcggcaaatc
gggcaggacgcgatggcggtcctgcagtcgcatgtctggccgggcaacgtccgccagctc
cgcaacaatgtcgagcgcgtgatgatcctggccggcggcggtccggaggcgatcatcacc
gccgatatgctgccgcaggacgtcggctcgatggtgccggcgatgccgacctccaacaat
ggcgagcacatcatgggcctgccgttgcgcgaggcgcgcgaggtgttcgagcgcgactat
ctgatcgcccagatcagccgcttctccggcaatatctcgcgcaccgcggagttcgtcggc
atggagcgctcggcgctgcatcgaaagctgaaggcgctcggggtcggctga

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