Bradyrhizobium pachyrhizi: QA639_24615
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Entry
QA639_24615 CDS
T09303
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpah
Bradyrhizobium pachyrhizi
Pathway
bpah00260
Glycine, serine and threonine metabolism
bpah00460
Cyanoamino acid metabolism
bpah00630
Glyoxylate and dicarboxylate metabolism
bpah00670
One carbon pool by folate
bpah00680
Methane metabolism
bpah01100
Metabolic pathways
bpah01110
Biosynthesis of secondary metabolites
bpah01120
Microbial metabolism in diverse environments
bpah01200
Carbon metabolism
bpah01230
Biosynthesis of amino acids
bpah01240
Biosynthesis of cofactors
bpah04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QA639_24615 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QA639_24615 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QA639_24615 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QA639_24615 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QA639_24615 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QA639_24615 (glyA)
Enzymes [BR:
bpah01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QA639_24615 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WFU52869
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Position
complement(5230931..5232232)
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AA seq
433 aa
AA seq
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MTSSSKTASAPDSFFTATLAQADPEIAAAIKGELGRQRHEIELIASENIVSRAVLEAQGS
VMTNKYAEGYPGARYYGGCEWVDVAETLAIERAKKLFGAGFANVQPNSGSQMNQAAFLAL
LQPGDTFMGLDLAAGGHLTHGSPVNMSGKWFKAAHYTVRREDQIIDMDEVQKQAEQVKPK
LIIAGGSAYSRAWDFKRFREIADSVGAYLLVDMAHFAGLVAGGVHASPVPHAHVTTTTTH
KSLRGPRGGLILTNDETLAKKLNSAIFPGLQGGPLMHVIAAKAVAFAEALRPDFKVYAKN
VVENAKALAETLRGHGLDIVSGGTDNHLMLVDLRPKGLKGNISEKALVRAAITCNKNGIP
FDPEKPFVTSGLRLGTPAATTRGFGVAEFKQVGGMIAEVLNALAQSPDGKAPLVEAAIKE
RVKALTDRFPIYQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacctcatccagcaagaccgcttccgcgcccgattccttcttcaccgcgaccctcgcc
caggccgatcccgaaatcgctgccgcgatcaagggcgagctcggccggcagcgtcacgag
atcgagctgatcgcctcggaaaacatcgtcagccgcgccgtgctggaggcgcagggctcg
gtgatgaccaacaaatacgcggagggttatccgggcgcgcgctactacggcggttgcgag
tgggtcgacgttgccgagacgctggcgatcgagcgcgccaagaagctgttcggcgccggc
ttcgccaacgtccagccgaactccggcagccagatgaaccaggcggcgtttctggcgctg
ctgcaacccggcgacaccttcatgggcctcgacctcgcggccggcggccatctcacccac
ggttcgccggtcaacatgtccggcaagtggttcaaggccgcgcactacacggtacgccgc
gaggaccagatcatcgacatggacgaagtccagaagcaggccgagcaggtcaagccgaag
ctgatcatcgccggcggctcggcctattcgcgcgcctgggacttcaagcgcttccgcgag
atcgcggactccgtcggcgcgtatctgctggtcgacatggcgcatttcgcgggcctcgtc
gccggcggcgtgcatgcctcgccggtgccgcacgcccacgtcaccaccacgacgacgcac
aagtcgctgcgcggcccgcgcggcggcctgatcctcaccaatgacgagacgctggccaag
aagctgaactcggcgatcttcccgggcctgcagggtggtccgctgatgcacgtcatcgcc
gccaaggcggtggcgttcgccgaagcgctgcggccggacttcaaggtctacgccaagaac
gtggtcgagaacgccaaggcgctggcggagacgctgcgcggccacggcctcgacatcgtc
tccggcggcaccgacaaccatctgatgctggtcgatctcaggccgaagggcctgaagggc
aacatctccgagaaggcgctggtgcgcgccgccatcacctgcaacaagaacggcatcccg
ttcgatcccgaaaagccgttcgtcacctccggcctgcgtctcggcacgccggcggcgacc
acgcgcggcttcggcgtcgccgagttcaagcaggtcggcggcatgatcgcggaagtgctg
aacgcgttggcgcagtcgccggacggcaaggcgccgctggtcgaggctgcgatcaaggag
cgcgtcaaggcgctgaccgatcgcttcccgatctatcagtaa
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