Bradyrhizobium pachyrhizi: QA639_26080
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Entry
QA639_26080 CDS
T09303
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bpah
Bradyrhizobium pachyrhizi
Pathway
bpah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QA639_26080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpah03021
]
QA639_26080
03400 DNA repair and recombination proteins [BR:
bpah03400
]
QA639_26080
Enzymes [BR:
bpah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QA639_26080
Transcription machinery [BR:
bpah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QA639_26080
DNA repair and recombination proteins [BR:
bpah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QA639_26080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
IDH
DUF4249
Motif
Other DBs
NCBI-ProteinID:
WFU53138
LinkDB
All DBs
Position
complement(5515372..5516403)
Genome browser
AA seq
343 aa
AA seq
DB search
MGETVTIQKNWQELIRPNKLQVTPGSDASRFATVVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGAVTA
GDIQTVGDVTVLNPDLQLCTLDDGAEIRMEFTVTTGKGYVAAERNRPEDAPIGLIPVDSL
FSPVRKVSYKVENTREGQILDYDKLTMTIETNGAITPEDAVAYAARILQDQLNVFVNFEE
PRKEVTQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacagtgacgatccagaaaaattggcaagaactcattcgaccgaacaagctg
caggtgacgcccggctcggacgcgagccggttcgccaccgtggtcgccgaaccgctcgag
cgtggcttcggccagacgctcggcaacgcgctgcgccgcatcctgttgtcctcgctgcag
ggcgcggcggtgcagtcggtgcatatcgacggcgtgctgcacgagttctcctcgatcgcc
ggtgtccgtgaagacgtcaccgacatcgtcctcaacatcaaggacatctcgatcaagatg
cagggcgaaggcccgaagcgcatggtcgtgaagaagcagggcccgggcgccgtcaccgcc
ggcgacatccagaccgtcggcgatgtcacggtgctcaaccccgacctgcagctctgcacg
ctggacgacggcgccgagatccgcatggagttcacggtcacgaccggcaagggctatgtc
gccgccgagcgcaaccgtcccgaggatgctccgatcggcctgatcccggtcgacagcctg
ttctcgccggtccgcaaggtctcctacaaggtcgagaacacccgtgagggccagatcctc
gactacgacaagctgaccatgacgatcgagaccaacggcgcgatcacgccggaggacgcg
gtggcctacgccgcgcgcatcctgcaggatcagctcaacgtgttcgtcaactttgaagag
ccgcgcaaggaagtcacgcaggagatcatccccgatctcgcgttcaacccggcgttcctc
aagaaggtcgacgaactcgagctgtcggtgcgttcggcaaactgcctgaagaacgacaac
atcgtctacatcggcgacctcgtgcagaagtcggaagcggaaatgctccgcaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggcccagatgggtctgcacctc
ggcatggaagtgccgggctggccgccggagaacatcgacgagctcgccaagcgcttcgag
gatcactactga
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