Bradyrhizobium pachyrhizi: QA639_31320
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Entry
QA639_31320 CDS
T09303
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bpah
Bradyrhizobium pachyrhizi
Pathway
bpah00470
D-Amino acid metabolism
bpah00550
Peptidoglycan biosynthesis
bpah01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QA639_31320 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QA639_31320 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpah01011
]
QA639_31320 (murD)
Enzymes [BR:
bpah01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
QA639_31320 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bpah01011
]
Precursor biosynthesis
Amino acid ligase
QA639_31320 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
IlvN
AdoHcyase_NAD
ADH_zinc_N
MurD-like_N
TrkA_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
WFU54107
LinkDB
All DBs
Position
complement(6587114..6588514)
Genome browser
AA seq
466 aa
AA seq
DB search
MIPVTSFSGKTVAVFGLGGSGLASCQALKAGGAEVIAADDNADNVVKAAQAGFTTADLRT
VSWANFAALILTPGAPLTHPAPHWSVLKAREVGCEVIGDVELFCRERRRHAPNAPFVAIT
GTNGKSTTTALIAHLMKVAGYDTQMGGNIGTAILSLEPPRMGRVHVIEMSSYQIDLAPSL
DPSVGILINISEDHIDRHGTLEHYAAVKERLVAGVQAGGTAIVGVDDIWCRNIADRLDRA
GKRVVRISVKNPLPDGLYVEHETIVRASGAARSEITRLGGIGSLRGLHNAQNAACASACA
LAMGIATDVLQNGLRSFPGLAHRMEQVGRRGNVLFVNDSKGTNADAAAHALSSFADIYWI
AGGKPKAGGITSLTEYFPRIRKAYLIGEAAAEFSGTLGERVPHDMSGTLDVAIASAARDA
EASGLAEAVVLLSPACASFDQYRNFEIRGTAFRDIVQALPGVKPVV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcacctccttctccggcaagacggtcgcggtgttcgggctcggcggctcc
gggcttgcgagctgccaggcgctgaaggctggcggcgccgaggtgatcgcggccgacgac
aatgccgacaacgtcgtcaaggcggcgcaggccggcttcaccaccgctgatctgcgcacc
gtgtcgtgggcgaatttcgccgcgctgatcctgacccccggcgcgccgctgacccatccg
gcgccgcactggagcgtgctgaaggcgcgcgaggtggggtgcgaggtgatcggcgacgtc
gaactgttctgccgcgagcggcgccgtcacgcgccgaacgcgccattcgtcgccatcacc
ggcaccaacggcaaatcgaccaccaccgcgctgatcgcgcatctgatgaaggtcgccggc
tacgacacccagatgggcggcaatatcggcaccgcgatcctgtcgctggagccgccgcgc
atggggcgtgtccatgtgatcgagatgtcatcctaccagattgatctcgcaccgtcgctc
gatccgtcggtcggcatcctgatcaacatcagcgaggatcacatcgatcgccacggcacg
ctcgagcattacgcggcggtgaaggagcggctggtcgccggcgtacaggccggcggcacg
gcgatcgtcggcgtcgacgacatctggtgccgcaacatcgccgaccggctcgatcgcgcc
ggcaagcgcgtggtgcgcatctcggtgaagaacccgctgcccgacggcctctatgtcgag
cacgagaccatcgtgcgtgcgtcgggcgcggcgcgcagcgagataacgcggttaggcggc
atcggctcgttgcgcggtctgcacaatgcgcagaacgccgcctgcgcctcggcctgcgcg
ctggcgatggggatcgcgaccgacgtgctgcagaacggcctgcgcagcttcccgggtctc
gcgcaccgcatggagcaggtcggccgccgcggcaacgtgctgttcgtcaacgactccaag
ggtaccaacgcggatgcggccgcgcatgcgctatcctcgttcgccgacatctactggatc
gccggcggcaagccgaaggccggcggcatcaccagcctgaccgaatattttccgcgcatc
cgcaaggcctatctgatcggcgaggcggcggccgaattctccggcacgctcggcgagcgc
gtcccgcacgacatgtccggcacgctcgacgtcgcgatcgccagcgccgcgcgcgatgcc
gaggcatcggggctcgcggaagccgtcgtgctgctgtcgccggcctgcgcctcgttcgac
cagtaccgcaatttcgaaatccgcggcaccgccttccgcgacatcgtccaggcattgccc
ggcgtcaagccggtggtgtag
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