KEGG   Bradyrhizobium pachyrhizi: QA639_39020
Entry
QA639_39020       CDS       T09303                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bpah  Bradyrhizobium pachyrhizi
Brite
KEGG Orthology (KO) [BR:bpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpah03400]
    QA639_39020
Enzymes [BR:bpah01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QA639_39020
    5.6.2.6  RNA 3'-5' helicase
     QA639_39020
DNA repair and recombination proteins [BR:bpah03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    QA639_39020
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr Helicase_C DEAD Cas3-like_C_2 MksE
Other DBs
NCBI-ProteinID: WFU60089
LinkDB
Position
complement(8254462..8257164)
AA seq 900 aa
MVCLTRLVAARASARAAGESARATLRAADRAHWGGQDAGGVLADTGGVEWRRIRPRCFCS
PPPERGGRRAPARDSAAERDGWGSATGTEQAPDPHPNPPRFRGREPDDLASDEIESRTVR
PALISTGRGVRRSGGLHTLYISPLKALAVDIARNLETPVAEMGLPIRIETRTGDTPVSRR
QRQRRYPPDILLTTPEQLALLLASDDAPFLFSSLKRIVLDELHALVTSKRGDLLSLGLAR
LWTIAPQIRAIGLSATVAEPEQLARFLVPQPGGENASADVVTAGGAAPPVVEMLDTRERL
PWSGHSARHALPEVYELIKRNKTTLVFVNTRSQAEMLFQDLWRMNDDGLAIALHHGSLDV
AQRRKVEDAMAAGKLRGVVCTSSLDLGVDWGDVDLVINIGAPKGSSRLMQRIGRANHRFD
EASRAVLVPANRFEVLECRVAIDAIAENAQDTPPLRSGALDVLAQHVLGCACGKPFLSDE
LYDEVRTVAPYASLARSDFDDVVDFVATGGYALKTYERFARIKQDKQGRWRVTNPKVRQS
YRLNVGTIVEETMLKVRLVRSRAGGQGKSSGSTGAIARGGRMLGEIEEVFIEGLVPGDTF
VFGGEVVRYEALVEDQVYVSRANDKDAKVPSYMGGKFPLSTYLAERVRKLLDNSRAWNGL
PDQVHDWLSLQRKFSRVPAVRELLVETFPRGGSHYLVCYPFEGRLAHQTLGMLLTRRLER
ARARPLGFVANEYALAVWGVGDLSFMIRHGKLDLNALFDPDMLGDDLEAWLAESALMKRT
FRNCAIISGLIARRFTDEEKSRRQVLFSTDLIYDVLRKHQADHVLLRAARGDAAAGLLDL
RRLSDMLARIHGRITHKDLDHVSPLAVPALLEIGRESVYGEASDELLAEAAEELVREATT
NT seq 2703 nt   +upstreamnt  +downstreamnt
ctggtttgcctcacgcggctggtcgccgcgcgagcatcagctcgcgctgctggcgaaagc
gcgcgagcaacgctccgcgctgctgatcgcgcccactggggcgggcaagacgctggcggg
gttcttgccgacactggtggagttgagtggagaaggattcgaccgcggtgcttctgctca
cctccccctgaaaggggaggtcggcgtgctccggcgcgcgatagcgcggccgagcgcgac
gggtgggggtcagccacgggcacggagcaagcgcctgacccccaccccaaccctccccgt
ttcagggggagggagcccgacgatctcgcaagcgacgaaattgaatcgaggacagttcgc
ccagcccttatctccaccggccgtggcgttcgccgcagcggcgggctgcacacgctttac
atctcaccgctgaaagcgctcgcggtcgatatcgcgcgcaatctggagacgccagtcgcc
gagatggggctgccgatcaggatcgagacccgcaccggcgacacgccggtgtcgcggcgg
cagcggcagcggcgctatccgcccgacatcctgctcaccacgccggagcagctggcgctg
ctgctggcatccgatgacgcgccgttcctgttctcctcgctgaagcgcattgtgctcgac
gagctgcatgcgctcgtcacctccaagcgcggcgatctgctgtcgctcggacttgcgcgg
ctctggaccatcgcgccgcagatccgcgccattggtctctcggcgacggtcgccgagccg
gagcagctcgcgcgcttcctggtgccgcagcccggtggcgagaacgcgtccgctgacgtc
gtcaccgccggcggcgccgcgccgccggtggtcgagatgctcgacacgcgggaacggctg
ccatggtccggccacagcgcgcgccacgcgctgcccgaggtctacgagctgatcaagcgc
aacaagaccacgctggtgttcgtcaacacccgcagccaggccgagatgctgttccaggat
ctctggcgcatgaatgacgatggccttgcgatcgcgctgcatcacggctcgctcgacgtc
gcgcagcgccgcaaggtcgaggacgcgatggccgccggaaagctgcgcggcgtggtctgt
acctcttcgctcgatctcggcgtcgactggggcgatgtcgacctcgtcatcaatatcggc
gcgccgaaaggttcgtcgcggctgatgcagcggatcggccgcgccaaccaccgcttcgat
gaggcctcgcgcgccgtgctggtgccggccaaccggttcgaggtgctggaatgccgtgtc
gcgatcgacgcgatcgccgagaatgcgcaggacacgccgccgctgcgctcgggcgcgctc
gacgtgttggcccagcacgtgctcggctgcgcctgcggcaagccgtttctgtccgatgaa
ctctatgatgaggtcaggaccgtcgcgccctatgcatcgctcgcacgctccgatttcgac
gatgtggtcgacttcgtcgccaccggcggctacgcgctgaagacctatgagcgtttcgcg
cgcatcaagcaggataagcagggccgctggcgcgtcaccaatccgaaggtgcggcagagc
tatcgcctcaacgtcggcaccatcgtcgaagagaccatgctcaaggtgcggctggtgcgc
tcgcgcgccggcggccaaggaaaaagtagcggatcgaccggcgcgatcgcccgcggcggc
cggatgctgggtgagatcgaggaagtcttcatcgagggcctcgtgcccggcgacacgttt
gtctttggcggcgaggtggtgcgctacgaggccttggttgaagaccaggtctatgtctcc
cgtgccaatgataaagatgcaaaagtgccgtcctatatgggcggcaagttcccgctgtcg
acctatctcgccgaacgcgtccgcaagctgctggacaacagccgcgcctggaacggattg
ccggaccaggtgcacgactggctgtcactgcagcgaaaattctcgcgtgtcccggcggtg
cgcgagctactggtcgagacctttccgcgcggcggcagccattatctggtctgctacccc
ttcgagggccggctcgcgcatcagacgctcggcatgctgctgacgcgccggctggagcgc
gcccgcgcccgtccgctcggcttcgtcgccaacgaatatgcgctcgcggtctggggcgtc
ggcgatctctccttcatgatccgccacggcaagctcgatctcaacgcgctgttcgatccc
gacatgctcggcgacgacctcgaggcgtggcttgcggaatccgcgctgatgaagcggacc
ttccgcaactgcgccatcatctccgggctgatcgcgcgccgctttaccgacgaggagaag
tcgcgccgccaggtgctgttctcgaccgacctgatctacgacgtgctgcgcaagcaccag
gccgaccatgtgctgctgcgcgccgcgcgcggcgacgccgccgcgggattgctcgatctc
cgccgcctcagcgacatgcttgcgcgcatccacggccgaatcacccacaaggacctcgac
cacgtttctccgcttgccgtccccgcgctgctggaaatcggccgcgagtcagtttatggc
gaagcatccgacgagctcctggccgaggcggccgaggaactcgtgcgggaggcgacgacg
taa

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