Borrelia parkeri: X966_03220
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Entry
X966_03220 CDS
T03987
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bpak
Borrelia parkeri
Pathway
bpak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X966_03220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpak03400
]
X966_03220
Enzymes [BR:
bpak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
X966_03220
DNA repair and recombination proteins [BR:
bpak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X966_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
ResIII
Viral_helicase1
AAA_22
PDDEXK_1
UvrD_C_2
DEAD
AAA_30
STPPase_N
Motif
Other DBs
NCBI-ProteinID:
AHE62944
LinkDB
All DBs
Position
complement(668883..672326)
Genome browser
AA seq
1147 aa
AA seq
DB search
MREIIDKIKYNEKILIEASAGTGKTYILENTITNLLINKTYSPSEILVLTFTKKATEEMH
IRILKSIENAYQNSQTDKSLKKIYEQSNKIFISTINKFALHSLNNFQIETENFVKYSVKE
NFTSEIDEIVYECLRKSDSLKKELAIKDDEFEIFKSKFKTTKDMIQYIRQGYKRDKTQEL
GDWIKTQTIFKTMLTNQDRLIHEYNLIVETLNKMTMEEKRTFLNKHNQGIKISEIKYSNE
KDIVKITDILANNKFFSKIIESNLKKNVTLLPKELKIQTALRELSYATNTNKEDKNTLRR
FINLKVEYKILKYIDKELANTINATNTIDQKHIMLNFKKHLESRDNKLLNSIKSRYKIIL
IDEAQDLNLIQIEIFKLLNSCGIKLIFIADPKQIIYTFRNADISYYNQGIKDQIKDNAKI
TLLTNYRSNKKLVESLNIMFNNIYNKTHTAKIEKIEFTKSKTESKNDENKIFINDQEIEA
INIIETESENENILQKTAITIKYLLTNGKIYDNNKLRQIKESDIKVLCRTSKEIDLIDKE
VKNQNIKTNKIEESFFKTKEFSEIFYLIKCFDRKQNFQTLNYILTSKIINLPWELYLSLL
EKNEIKHIEEAISDIIYLLENQEITLIKAIDEIISKKDLWLNLAKIFNNTTFTEFAQSKK
SYREILINEEKFEELKNYEISLDFISKIYYEDKTIESLICTLEDLILNKDTEQDEEQITT
QSDQSIEILTIHKSKGLSVNIVFLIGDIQYNDSLLKKSDTFYKFYLENKIEYDFLKLKEN
QQSAKHKILNEEKNIFYVGTTRSRFALFIINKGTIINKMLELAEIKTIDKINLDFNVYNL
IKTHKFNKLEKNDNKEIKLIPPTPINKHLFRREYTHSYTSLASNYKSTYHTNQETKNDET
YENDANCTEETLPKGKDIGNILHVIMKDINFSDAKDDFNNFQKINIALIQKRIEHFNSKL
NTPKIQEMLIKMIYNILNTKIRFIDARLCDIQELQKEMEFLIKIDTKIYEQKSLFKNHNK
LDLTFNDRYIKGIIDLIFKINNKVYILDYKTNYLGANLKDYNLTNLKKKMKQEKYDLQYK
IYALGTKKILFKSPEEYNKYFGGVIYLFTRAFQKNIKEQSKTQNGIYFTIPNFKELDLEQ
IYLQLKY
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaataatagacaaaatcaaatacaacgaaaaaatattaattgaggcttcagca
ggaactggaaagacctacatacttgaaaatactattacaaacttactcataaataaaacg
tactctccaagcgagattctagtgctaacattcacaaaaaaagcaacagaagaaatgcat
attagaatattgaaatcaattgaaaatgcatatcaaaattcacaaacagataaatcttta
aaaaaaatttacgagcaatcaaataaaatatttatctcaaccataaacaaatttgcacta
cattctctaaacaattttcaaatcgagacagaaaactttgtcaaatacagtgtaaaagaa
aattttacatcagaaatagacgaaatagtttatgaatgtttaagaaaatcggattcatta
aaaaaagaattagcaatcaaagatgatgaatttgaaatctttaagtctaaattcaaaact
acaaaagacatgattcaatatataagacaagggtataaaagagacaagacacaagaactt
ggagattggataaaaacccaaacgatttttaaaacaatgcttacaaatcaagatagatta
attcatgagtataacttaatagtcgaaacattaaacaaaatgactatggaagaaaaaaga
actttcctaaataaacataatcaaggaatcaaaatatcagaaataaaatatagtaatgaa
aaagatatagtaaaaatcacagacatacttgcaaacaacaaatttttttcaaagataata
gaatctaatcttaaaaaaaatgttactctcttacctaaggaactaaaaatacaaaccgct
ttaagagaacttagctatgcaacaaatacaaataaagaagataaaaacacacttagaaga
tttattaacctaaaagttgaatataaaatacttaaatatatagacaaagaacttgcaaat
accattaatgcaacaaacacaatagaccaaaaacatataatgctaaacttcaaaaaacac
ctggaatctcgtgataacaaattattaaattcaataaaaagcagatataaaataatacta
atagatgaagcacaggatttaaacctaatacaaatagaaatatttaaactacttaactct
tgtggcataaaactaatatttatagccgatcctaagcaaataatttatacatttagaaat
gctgatatatcatattataaccaaggtataaaagatcaaataaaagataacgcaaaaata
accttactaacaaattacagatcaaataaaaaattagttgaatctttaaatattatgttt
aataatatctataataaaacacacacagctaaaatcgaaaaaatagaatttactaaatca
aaaacagagtctaagaatgacgaaaataaaatttttataaatgatcaagaaatagaagca
ataaacataatagaaactgaaagtgaaaatgaaaatattttacaaaaaacagctataaca
ataaaatatctactaacaaacggaaaaatttatgataacaataagcttagacaaattaaa
gaatcagacataaaagtactttgcagaacaagcaaggaaatagatttaatagacaaggaa
gttaaaaatcaaaatataaaaacaaataagatcgaagaatcattctttaagacgaaagaa
tttagcgaaatattttatcttataaaatgtttcgacagaaaacaaaattttcaaactcta
aactatatcttaactagcaaaataataaaccttccgtgggaattatacctaagtctactt
gaaaaaaatgaaataaaacacatagaagaagccattagtgacataatatatttacttgaa
aatcaagaaataacattaataaaagcaatagacgaaatcatatcaaaaaaagatttatgg
ctcaatttggcaaaaatttttaataatactacctttactgaatttgcacaatcaaaaaaa
agctacagagaaatcctaataaatgaagaaaaatttgaagaacttaagaactacgaaata
agtctagacttcatttccaaaatttactatgaagataaaaccatagaatcattaatatgc
actctagaagatctaatactaaataaagatactgaacaagatgaagagcaaatcactacc
caaagtgatcaatccatagaaatactaacaattcataaatcaaaaggattaagtgttaat
atcgtatttctcataggtgatattcaatacaatgatagcttactgaaaaaatcagataca
ttttataaattttacttagaaaataagatagaatatgattttttaaaattaaaagaaaat
caacaatctgccaaacataagattttaaatgaagagaaaaatattttttatgtaggaaca
acacgatcaagatttgcactatttattatcaataaaggcacaataataaataaaatgtta
gagctagcagaaataaaaacaattgataaaataaatttagactttaatgtatacaatctg
attaaaacccataaatttaataaattagaaaaaaatgataacaaagaaataaaattaatc
cctccaacaccaataaacaaacatttatttagaagagaatatacacatagctatacaagt
cttgcatcaaactataaatcaacttaccatacaaatcaagaaacaaaaaatgatgagact
tatgaaaatgatgctaattgtactgaagaaacactcccaaagggcaaagatattggtaat
attttacatgtcataatgaaagatataaattttagcgatgcaaaagatgattttaacaat
tttcaaaaaatcaatattgctcttatacagaaaagaatcgaacatttcaattcaaagtta
aatacacccaagatacaagaaatgctaataaaaatgatttataacatattaaatacaaaa
atcagatttattgacgcaagactgtgtgatattcaagaattacaaaaagaaatggaattt
ttaatcaagatagatacaaaaatttatgaacaaaagtctctctttaaaaatcacaacaag
ttggatttaacattcaatgacagatatataaagggaatcattgatcttatatttaagata
aataataaagtatacattttagactataaaacaaattatcttggagcaaatttaaaagat
tataatttaactaacttaaaaaagaagatgaaacaagaaaagtatgacttacaatataaa
atctacgcactaggaacaaaaaaaatactctttaagagtccagaagaatataataaatat
tttggaggagtaatatatctctttacaagagcatttcaaaaaaatattaaagaacaatct
aaaacacagaatgggatttatttcaccataccaaattttaaagaattagatctagaacaa
atatatttgcaattaaaatattaa
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