Borrelia parkeri: X966_03950
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Entry
X966_03950 CDS
T03987
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
bpak
Borrelia parkeri
Brite
KEGG Orthology (KO) [BR:
bpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpak03021
]
X966_03950
Transcription machinery [BR:
bpak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X966_03950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_10
GerE
Phage_terminase
HTH_DeoR
HTH_23
HTH_28
KORA
HTH_25
Sigma70_r4_2
HTH_11
V-SNARE_C
HTH_Tnp_ISL3
ENT
Formin_GBD_N
Motif
Other DBs
NCBI-ProteinID:
AHE63077
LinkDB
All DBs
Position
complement(820194..820997)
Genome browser
AA seq
267 aa
AA seq
DB search
MNIFSNEDLNIYLKSVREHRLITHEEEIELAKQIKLGDLKAKNKMINANLRLVLKIIKRY
AGKGLKVEDLIQEGNLGLIRAAEKYDPSKNTKFSTYASFWIKQSLQRALNTKTRLVKVPY
RKENLILQINKYLMEEEKSPKKEDIMERFNLTTAQYIKIIPYLEKEYSLDKKIEGSENST
LLNLYEDNSFNPESTLEQNSTLKHLNHILETKLNEKERYIIIKRYNLDNSDKKSTLKDIS
NELGISSETVRQIEKRVLKKLKEELYQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatttagcaatgaagatttaaacatatacttaaaatccgtaagagaacacaga
ctaataactcacgaagaagaaattgaacttgcaaaacaaattaaactaggagacctgaaa
gccaaaaacaaaatgataaatgccaatttacgtcttgtcttaaaaataattaaaagatat
gctggcaaaggattaaaagtcgaagacttaatacaagaaggaaatctgggtttaattaga
gcagctgaaaaatatgatccaagtaagaacaccaaattctcaacttacgcctcattttgg
attaaacaatcgcttcaaagagcattaaataccaaaacaagacttgtaaaggtgccatac
agaaaagaaaatttaatactccaaataaataaatatctcatggaagaagaaaaatcacca
aaaaaagaagacataatggaaagatttaacttaacaactgctcaatatataaaaatcatt
ccctatcttgaaaaagaatattcccttgataaaaagatcgaaggttcagaaaattctaca
ctactaaacctctatgaagacaattcttttaatcctgagagtactcttgaacaaaattca
acattaaaacatctcaatcacatactagagaccaaactaaatgaaaaggaaagatacatc
ataataaaaagatataacttagacaacagtgataaaaaaagcaccttaaaagacatttcc
aatgaacttggaatctcctcagaaaccgttagacaaattgaaaaaagggtacttaaaaaa
ctcaaagaagaactttatcaataa
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