Bacillus paramobilis: AABL52_01935
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Entry
AABL52_01935 CDS
T11451
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
bpam Bacillus paramobilis
Pathway
bpam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AABL52_01935 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpam03019
]
AABL52_01935 (rnr)
03016 Transfer RNA biogenesis [BR:
bpam03016
]
AABL52_01935 (rnr)
Enzymes [BR:
bpam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AABL52_01935 (rnr)
Messenger RNA biogenesis [BR:
bpam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AABL52_01935 (rnr)
Transfer RNA biogenesis [BR:
bpam03016
]
Prokaryotic type
tRNA degradation factors
AABL52_01935 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WZF31171
UniProt:
A0ABZ2VPN5
LinkDB
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Position
403586..406018
Genome browser
AA seq
810 aa
AA seq
DB search
MEEIIQEHIDKLLLFMREEAYKPLTIQELEEAFGIEGSEGFKDFVKALVTMEEKGLVIRT
RSNRYGLPEKMNLVRGKLIGHARGFAFVVPDEKKTGDDDLFIPPTELNGALHGDTVLARL
SSQSSGSRQEGSIVRILERGTKELVGTYTESKNFGFVIPDNKRWTSDIFILKSASMGAVE
GHKVVVKITSYPENRLSAEGEVIQILGHKNDPGVDILSVIHKHHLPLAFPEEVMEHANSV
PETISEEDLKDRRDLRDQMIVTIDGADAKDLDDAVTVTKLENGNYKLGVHIADVSHYVQE
GSPIDVEAAERATSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINNLGDVVKH
EIFQSVIKTTERMTYADVRSILEDEDEELIKRYEPLVPMFKEMGQLAQILREKRMRRGAI
DFDFKEAKVLVDEEGKPTDVVMRDRSVSEKLIEEFMLVANETVAEHFHWMNVPFMYRVHE
DPKEDKLERFFEFVTNFGYAVKGRANEIHPRALQQILEMVQGQPEEVVISTVMLRSMKQA
RYDADSLGHFGLSTEFYTHFTSPIRRYPDTIVHRLIREYIINGKVDNETQAKWRENLPEI
AEHSSNMERRAVEAERETDEMKKAEYMVDKIGEEYDGMISSVTNFGLFVELPNTIEGLVH
VSYLTDDYYRYDEKHFAMIGERTGNVFRIGDEITIRVINVNKDERAIDFEIVGMKGTPRR
KFKDRPVVIEQPRTGRKKRGGRSERSNERGGERGTGRKVDRGGKGKGRGSASASTSTSAS
QPGKQDGNGKKKKAFFENVPGFKKKKKKRK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaatcatacaagaacatattgataagttgttattatttatgagagaagaagcg
tataaaccgctaacgatacaagagttagaagaggcatttggaattgaaggttctgagggc
tttaaagattttgtaaaggcacttgtaacgatggaagagaagggacttgttattcgcaca
cgtagtaaccgttacggtcttcctgaaaagatgaatttagtacgtggtaagttaattgga
catgcacgtggctttgcattcgttgtaccagacgaaaagaaaacgggagatgatgatctt
ttcatcccgcctacagagttaaacggtgcacttcatggcgatactgtattagcacgcctt
agttcccaatcgagcggttcgcgtcaagaaggttcaattgtacgcattttagagcgcggc
acgaaagaactagttggtacatatacagaatcgaaaaactttggatttgttatacctgac
aataagcgctggacgagtgatatctttatcttgaaaagtgcatcaatgggtgctgtagaa
ggtcataaagtagttgtgaaaattacgagctatccagagaatcgtttaagcgcagaaggt
gaagttattcaaattctaggtcataaaaatgatccaggagtagatattttatctgtcatt
cataaacatcatttacctttagcatttcctgaagaagtgatggagcatgcaaacagtgta
ccagaaacgatttcagaagaagatttaaaagatcgccgtgacctgcgtgaccaaatgatt
gtaacaattgacggtgcagatgcgaaagatttagatgacgctgttacagtaacgaagctc
gagaacggtaactacaagcttggcgttcatattgcggatgtaagtcattacgttcaagaa
ggttctccaattgatgtagaagcagcggaaagagcaacgagtgtatatcttgttgaccgt
gtaattccgatgattccgcatcgtctatctaacggtatttgttcgttaaacccgaaagta
gaccgtctgacgttatcttgtgaaatggaaatcaacaacttaggtgatgttgtaaagcat
gagattttccaaagtgtgattaaaacgacagagcgtatgacgtatgctgacgtaagaagc
attttagaagatgaggacgaagagttaatcaaacgctatgagccgctagtaccgatgttt
aaagagatgggtcaattggcacagattttacgtgaaaaacgtatgcgccgtggtgcaatt
gactttgactttaaagaagcgaaagtattagtagacgaagaaggtaaaccgacagatgtt
gtcatgcgtgatcgttctgtatcagagaagttaattgaagaatttatgcttgttgcgaac
gaaacagtagcagagcatttccactggatgaacgtaccattcatgtaccgtgtccatgag
gatccgaaagaagataagctggaacgtttcttcgagtttgtaacaaacttcggatatgca
gtaaaaggacgtgcgaatgaaatacatcctcgtgcgctgcaacaaattcttgaaatggtt
caaggacagcctgaagaagtagttatttcaacagtaatgcttcgttcaatgaagcaagcg
cgttacgatgcggatagcttagggcatttcggtttatcaactgagttctacacacatttc
acatcaccaattcgtcgttacccagatacaatcgttcatagattaattcgtgaatacatc
attaacggtaaagtcgacaatgaaacacaagcgaaatggcgtgaaaacttacctgaaatt
gcagagcattcttctaatatggaacgccgtgctgttgaagcagaacgtgaaacagatgaa
atgaaaaaagcagagtatatggttgataagatcggcgaagagtatgacggtatgattagc
tctgtaacaaacttcggtttattcgtagagcttccaaatacaattgaaggtcttgtacat
gttagctacttaacggatgattactaccgttatgacgagaaacatttcgcaatgatcgga
gaacgtacaggtaacgtattccgcatcggagacgaaattacaattcgtgttattaacgta
aacaaagacgagcgtgcaatcgactttgaaatcgttggcatgaaaggtacgcctcgtcgt
aagttcaaagatcgcccagtcgttatcgaacagccaagaacaggcagaaagaaacgcggt
ggacgtagcgagcgcagtaatgagcgcggcggagaacgtggtacaggtagaaaagtcgac
cgtggtggcaaaggaaaaggaagaggatcagcttctgcttccacttccacgtccgctagt
cagccagggaaacaagatggtaacggtaagaagaaaaaagcattcttcgaaaatgtacca
ggattcaagaagaaaaagaaaaagcgtaagtaa
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