Bacillus paramobilis: AABL52_04515
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Entry
AABL52_04515 CDS
T11451
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bpam Bacillus paramobilis
Pathway
bpam03030
DNA replication
bpam03430
Mismatch repair
bpam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AABL52_04515 (dnaE)
03430 Mismatch repair
AABL52_04515 (dnaE)
03440 Homologous recombination
AABL52_04515 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpam03032
]
AABL52_04515 (dnaE)
03400 DNA repair and recombination proteins [BR:
bpam03400
]
AABL52_04515 (dnaE)
Enzymes [BR:
bpam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AABL52_04515 (dnaE)
DNA replication proteins [BR:
bpam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AABL52_04515 (dnaE)
DNA repair and recombination proteins [BR:
bpam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AABL52_04515 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF5986
tRNA_anti_2
Flavokinase
Motif
Other DBs
NCBI-ProteinID:
WZF31633
UniProt:
A0ABZ2VQX1
LinkDB
All DBs
Position
856711..860037
Genome browser
AA seq
1108 aa
AA seq
DB search
MKFVHLQCQTVFSLLKSACKIDELVVRAKELGFSSLAITDENVMYGVIPFYKACKKHGIQ
PIIGLTASIFSEEDEKSYPLVLLAENEIGYQNLLKISSSIMTKSKEGIPKKWLAHYAKGL
IAISPGKDGEIEQLLLEDKESEAEELARMYQSMFGNFYMSLQHHAIQDELLLQEKLPAFM
GRINVPVVATNDVRYINQSDALVHECLLSVESGTKMTDPDRPRLKTDQYYLKSSDEMEAL
FSHVEEAIYNTVEIAERCRVEIPFHINQLPKFPVPANETNDMYLRRVCEEGLQKRYGTPK
EVHIKRLNHELNVISSMGFSDYFLIVWDFMKYAHENHILTGPGRGSAAGSLVSYVLEITD
IDPIEYDLLFERFLNPERVTLPDIDIDFPDIRRDEMIRYVKDKYGQLRVAQIVTFGTLAA
KAAIRDIARVMGLPPRDIDIFSKLIPSKLGITLKDAYEESQSLREFIQGNLLHERVFEIA
KRVEGLPRHTSIHAAGVIMSQEPLTGSVAIQEGHNDVYVTQYPADALEELGLLKMDFLGL
RNLTLLENIIKFIVEKTGTQIDIRNLPLQDEKTFQLLGRGDTTGVFQLESGGMRNVLRGL
KPNEFEDIVAVNSLYRPGPMEQIPTFIESKHGKRKIEYLHPDLKPILERTYGVIVYQEQI
MQIASKLAGFSLGEADLLRRAVSKKNRDILDQERKHFVQGCLQNDYDETSAEKIYDLIVR
FANYGFNRSHAVAYSMIGYQLAYLKANYTLEFMTALLSSAIGNEDKIVQYIRETKRKGFH
VLPPSLQRSGYNFQIEGNAIRYSLLSIRNIGMATVTALLEEREKKMFEDLFEFCLRMPSK
FVTERNLEAFVWSGCFDDFGISRTNLWKSLKGALEYANLARDLGDAVPKSKYVQGEELSF
IEQLNKEKEALGFYLSSYPTAQYVKLAKELEIPSLAQAMRHKKKVQRAIVYITSVRVIRT
KKLQKMAFITFCDQNDEMEAVLFPETYIHFSDKLQEGAIVLVDGMIELRNHKLQWIVNGL
YPLEEMDVYEEKKDATVYVKLPSQYEKKQLNQVTKILFDYSGFAKVLIYYEKEHKMVQLS
RSLSIHPSEECLGALREIVGEENVVVKI
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttgtgcatttacaatgtcaaaccgtttttagtttattaaaaagtgcttgtaaa
attgatgagcttgtagtcagggcgaaagaacttggtttttcatcactcgctattacggat
gaaaatgttatgtatggtgttattccattttataaagcatgtaagaaacatggtatacag
cctattatcggcttaacagcttctatttttagtgaagaagatgaaaaatcttatccgctt
gttttacttgctgaaaatgaaataggctatcaaaatttattaaagatttctagtagcatt
atgacgaagtcaaaagaaggtattccgaaaaagtggcttgcccattatgcgaaaggatta
attgctatttcaccaggtaaagatggggaaatcgaacaattattattagaagacaaagag
agtgaagctgaagaattagctcgcatgtatcaaagcatgttcggcaatttttatatgagt
ttgcagcatcatgcgattcaagatgaactgcttctgcaagagaaattacctgcatttatg
ggtaggataaatgttccagtcgttgcaacaaacgatgtacgctacatcaatcaaagtgac
gcacttgttcatgagtgcttattatctgttgaaagtggaacgaaaatgactgatccagat
agaccgaggttgaaaacggatcaatattatttaaaatcatcagatgaaatggaagcacta
ttttctcacgtagaagaagcgatttataacacagtagaaattgcagaacgttgcagagta
gaaataccgtttcatataaatcaattaccgaaatttcctgttccggctaacgagacgaat
gatatgtatttacgccgcgtttgtgaagaagggttgcagaaacgttatggtacgccgaaa
gaagtacatataaagcgtttaaatcatgaattaaacgttatttctagtatggggtttagt
gattatttcctcatcgtatgggattttatgaagtatgcgcatgaaaatcatattttaaca
ggaccaggacgtggatcggcagctggctcacttgtttcttacgtattggaaattacagat
attgatccgattgaatatgatctattatttgaaaggtttttaaaccccgaacgtgtgaca
cttccagatattgatatcgattttccagatataagacgtgatgagatgattcgatatgtg
aaagataaatatggtcagcttcgtgttgcacaaatcgtaacgtttgggacgcttgcagca
aaagcggcaattcgagatattgcgcgtgtaatggggcttccgccgcgagatattgacata
ttctcaaaacttatcccatcaaagcttggtataacgttaaaagatgcatatgaggaatcg
caatcactccgtgaattcatacaagggaatctgttacatgagcgtgtgtttgaaattgca
aaacgtgtagaaggcttaccacgtcatacgtctattcatgcagctggcgttattatgagc
caagagccgttaacaggaagtgttgcaattcaagaagggcataacgatgtgtatgttacg
caatatccagctgatgcattagaagaacttggtttgttaaagatggactttttaggattg
cgtaatttaacgttacttgaaaatattataaagtttatcgtggaaaaaacggggacacaa
attgatataagaaatttaccacttcaagatgaaaagacgttccaattgttaggtagaggg
gatacaacaggtgtattccagcttgaatcaggtggtatgcgaaatgtacttcgcgggtta
aaaccgaatgaatttgaagatattgttgctgttaactcgttatatagaccaggaccgatg
gaacaaattccgacctttattgaatcaaagcatggaaaaagaaaaattgaatatttacat
ccggacttaaagccaattttagaaagaacgtacggtgtaattgtatatcaagaacaaatt
atgcaaattgcgtcgaaattagcaggattctcgctcggagaagcagatttattgcgccgt
gcagtgagtaaaaaaaatcgtgatattttagatcaggaacgtaagcattttgtgcaaggt
tgtttacaaaatgattatgacgagacatccgcggagaaaatttacgatttaattgtaaga
tttgcaaattacggttttaaccgaagtcacgcggtagcctacagtatgattggatatcag
cttgcctacttaaaagcgaattatacgctggaatttatgacagcactattatcaagtgca
attggaaatgaagataagattgtgcagtatatacgagaaacgaagcggaaaggttttcac
gttttgccaccgtctcttcagaggagtggttataattttcaaatagaaggcaatgcgata
cgttacagcttactttccattcgaaacatcggaatggctacagtgacagcattactcgaa
gaacgagagaaaaaaatgtttgaagatttatttgaattttgtcttcgcatgccatcaaag
tttgtaacagagcgaaatttagaggcgttcgtctggtctggatgttttgatgattttggt
atttcgagaacgaatttatggaaaagtcttaaaggagcgttagagtacgcaaatcttgca
cgtgatttaggagatgctgttccgaaatcgaaatacgtacaaggagaagagctctctttt
attgaacagttaaataaagaaaaggaagcattaggcttttatttatcaagctatccgaca
gcgcagtatgtaaagttagcgaaagaattagaaattccatctctcgctcaggcaatgcgg
cataagaaaaaagtacaaagagcaatcgtgtatataacaagcgtgagagtaattcgtacg
aaaaagttgcaaaagatggcgtttattacattttgtgatcaaaatgatgaaatggaagca
gttcttttcccggaaacgtatatacatttctcagataagttacaagaaggcgcaattgta
ttagttgacggcatgattgagcttagaaatcataagttgcaatggattgtaaatgggcta
tatccgttagaagaaatggatgtgtatgaagaaaaaaaagacgcaactgtttacgtgaaa
ttgccgtctcagtatgagaaaaagcagttaaatcaggttactaaaatattgtttgactat
tcgggttttgcgaaagtactaatttattatgaaaaggaacataaaatggtacaattatca
cgaagtttatcgattcatccaagtgaagaatgtttaggagcacttcgtgaaattgtcggg
gaagaaaatgtggttgtgaaaatataa
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integrated database retrieval system
