Bacillus paranthracis: NLJ82_01930
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Entry
NLJ82_01930 CDS
T08534
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bpan
Bacillus paranthracis
Brite
KEGG Orthology (KO) [BR:
bpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpan03009
]
NLJ82_01930 (rlmD)
Enzymes [BR:
bpan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NLJ82_01930 (rlmD)
Ribosome biogenesis [BR:
bpan03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NLJ82_01930 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_11
MTS
PrmA
Methyltransf_15
Cons_hypoth95
Methyltransf_23
DOT1
N6_N4_Mtase
TPMT
RrnaAD
Methyltransf_32
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
UTO09083
LinkDB
All DBs
Position
361282..362658
Genome browser
AA seq
458 aa
AA seq
DB search
MSTKMTPPVEKNEFIDVVFEDLTHDGAGVAKVKGYPIFVKNGLPGEEAQIKIIKVKKNFA
FGRLMKLHTKSPYRKDAECPVYNQCGGCQLQHLTYEGQLQAKEKQVRDVMQRIGGLSDVP
VHPVLGMKNPWVYRNKAQVPIGEREGGLVAGFYRQGTHDIINMESCLIQAEENDTLIQEV
KRICEKHGISAYNEERNKGTLRHVMARYGQVTGEIMLVFITRTAELPNKKAIIEEIAAKF
PEVKSIVQNVNTKRTNVIFGDKTTVLYGSEYIYDFIGDIKFAISARSFYQVNPEQTKVLY
DKTLEYAKLDGNETVIDAYCGIGSISLFLAQKAKKVYGVEIVPEAIEDAKRNAALNNMTN
AEFGVGEAEVVIPKWYKEGVIADTMVVDPPRKGCDEALLNTIIDMKPKRVVYVSCNPATL
ARDLKVLEEGGYKTQEVQPVDMFPHTTHVECVAWLKLV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaaaatgacgccaccagttgaaaaaaacgagtttatagatgtagtatttgaa
gatttaacacatgatggtgccggtgttgcgaaagtaaaaggctatcctattttcgttaaa
aacggattaccaggtgaagaagcacaaattaaaattattaaagtaaagaaaaacttcgca
ttcggtcgtttaatgaagcttcatacaaagagcccatatcgtaaagatgcagaatgccca
gtgtacaatcagtgcggtggttgtcagcttcagcatttaacatatgaagggcaattacaa
gcgaaagaaaaacaagtacgcgacgttatgcagcgcatcggcggattaagtgatgttcct
gttcatcctgtacttggcatgaagaatccgtgggtataccgtaacaaagcacaagtacca
attggagaacgtgaaggtggacttgtagctggattctatcgtcaaggaacgcatgacatc
attaatatggaatcgtgtttaattcaagcagaagaaaacgatacattaattcaagaagta
aaacgtatttgtgaaaaacacgggatttcagcgtacaatgaagagcgtaacaaaggaaca
cttcgccacgtaatggctcgttacggacaagtaacaggggaaattatgcttgtcttcatt
actcgtacagcagaattaccaaacaagaaagcaatcattgaagaaattgctgcgaaattc
cctgaagtaaaatcgattgttcaaaacgtaaacacgaaacgtacaaacgtaatcttcgga
gacaaaacgacagtactgtacggatcagaatatatttatgactttattggcgatattaaa
tttgcgatttcagcacgttcattctatcaagtaaacccagaacaaacgaaagtgctgtac
gataaaacgttagaatacgcaaaattagatggtaacgaaacagtaattgatgcctattgc
ggaattggatcaatctctttattcctagcgcaaaaagcgaaaaaagtgtatggcgttgaa
atcgtcccagaagcgattgaagacgcaaagcgtaacgcagcactaaacaacatgacaaac
gctgaatttggtgtaggagaagcagaagtagttattccaaaatggtataaagaaggcgta
atcgctgacacaatggtcgtagatccaccgcgtaaaggttgtgatgaggcactattaaac
acaatcatcgacatgaaaccaaaacgcgttgtatacgtatcatgtaacccagcaacatta
gcacgtgacttaaaagtactagaagaaggcggatataaaacgcaggaagtacaacctgtt
gatatgttcccgcatacgactcatgtagagtgtgtagcttggcttaagttggtataa
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