Bacillus paranthracis: NLJ82_02585
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Entry
NLJ82_02585 CDS
T08534
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bpan
Bacillus paranthracis
Brite
KEGG Orthology (KO) [BR:
bpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpan03009
]
NLJ82_02585 (rlmD)
Enzymes [BR:
bpan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NLJ82_02585 (rlmD)
Ribosome biogenesis [BR:
bpan03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NLJ82_02585 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
ANF_receptor
Methyltransf_11
UPF0020
Methyltransf_12
Ubie_methyltran
Sec2p
Motif
Other DBs
NCBI-ProteinID:
UTO09212
LinkDB
All DBs
Position
509745..511124
Genome browser
AA seq
459 aa
AA seq
DB search
MIQKQHESKLEVGQTFPVTIKRLGINGEGVGYFKRQVVFIPGALPGEEVVAETTKIQRGF
AEAKVKKVRKASPHRVKAPCPVYEECGGCQLQHLDYKEQLNQKRDIVVQAFQKYMNNGLE
EKILPTLGMENPWHYRNKSQLQVGRKDEKVITGLYKQNSHQLIDIAHCMIQHKATNEATK
VVRRILEKLNVSIYNEKKQKGLVRTIVTRTAVQTGEVQVTLITTKEELPNKEQFIAEVQK
QMPAVKSIMQNVNWRKTSVIFGDKTFKLAGKEVIQETLGDLSFELSARAFFQLNPEQTVV
LYNEAKKAAALTGNEKIVDAYCGVGTIGLWLANDAAEVRGMDVIPEAIADARKNAKRHGF
TNTKYEAGKAEQWLPKWVKEGWRPDVIVVDPPRTGCDDKLLETILKVKPKQVVYVSCNPS
SLARDVQALMKSYEVEYVQPVDMFPHTAHVENVVKLVRK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaaagcaacatgagagtaagttggaagttggtcaaacgttccctgtgacaatt
aaacgtcttgggattaacggagaaggcgttggttattttaagagacaagttgttttcatt
ccaggggcattaccaggagaagaagttgttgcagaaacaacgaaaattcagcgtggcttc
gctgaagcgaaagtgaaaaaagttcgtaaagcttcaccacatcgtgtgaaagcaccatgt
ccggtatatgaagagtgtggcggttgccaattgcaacatttagactataaagaacaatta
aatcaaaagcgtgatatcgttgtacaagcattccagaagtatatgaacaacggtttggaa
gagaaaattcttccgacgcttggcatggaaaatccatggcattatcgtaataagagtcaa
ctacaagtggggcgtaaagacgaaaaggttattacaggactgtataaacaaaattcacat
cagctaattgatattgctcattgtatgattcaacataaagcaacgaatgaagcgacaaaa
gttgtaagacgtattttagaaaaattaaatgtttctatttacaatgagaaaaaacaaaaa
ggtttagtacgtacaattgtgacacgtactgcagttcaaacaggggaagtacaagttaca
cttattacaacaaaagaagagttgccaaataaagaacaatttattgcagaagtacaaaaa
cagatgccagctgttaaatcaattatgcaaaatgtaaactggcgtaaaacatctgttatt
ttcggtgataaaacatttaaattagctggaaaagaagtaattcaagaaacacttggtgat
ttatcatttgaattatcagcacgtgcattcttccagttgaatccagaacaaacggttgtt
ttatacaatgaagcgaaaaaagccgctgctttaactggcaatgagaaaattgtagatgcg
tattgtggtgttggtacaatcggactttggcttgcaaatgatgcagcggaagtacgtggt
atggatgtaattccagaagcaattgcagacgcaagaaaaaatgcgaagcgtcacggattt
acaaatacgaaatatgaagcaggtaaagctgaacaatggctaccgaaatgggtaaaagaa
ggatggcgtccagatgtaattgttgtcgatccacctcgtacaggttgcgatgataaatta
ctggaaacaattttaaaagtgaagccgaaacaagttgtttacgtatcttgtaacccttct
tcattagcacgtgatgtacaagcgttaatgaagagctatgaagtggaatatgtacaacca
gttgatatgttcccgcatacagctcatgtagaaaatgtagtgaagcttgttagaaagtaa
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