Bacillus paranthracis: NLJ82_11905
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Entry
NLJ82_11905 CDS
T08534
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bpan
Bacillus paranthracis
Pathway
bpan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLJ82_11905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpan03019
]
NLJ82_11905
03009 Ribosome biogenesis [BR:
bpan03009
]
NLJ82_11905
Enzymes [BR:
bpan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NLJ82_11905
Messenger RNA biogenesis [BR:
bpan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NLJ82_11905
Ribosome biogenesis [BR:
bpan03009
]
Prokaryotic type
rRNA helicases
NLJ82_11905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UTO10934
LinkDB
All DBs
Position
2335814..2337178
Genome browser
AA seq
454 aa
AA seq
DB search
MVNVKNFLELGISETFNHTLRENGITEATPIQEQAIPVILSGKDIIGQAKTGTGKTLAFV
LPILEKIDPECSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRK
LKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPDSK
QTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAKPDALRFVMD
RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA
TDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE
KTLGAPIQREIIEQPKIKRVDENGKPVPRPAPKKSGEYRQRDSREGSRSDSRRGSRNGSR
SDSRNSSRNENNRSFNKPSNKKGSTKQGQQRRGR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaatgtgaaaaactttttagaattaggaattagtgaaacgtttaatcatacatta
cgtgaaaatggaattacagaagcaaccccaattcaagagcaggcaattcctgttatactg
tcaggtaaagatattattgggcaggcgaaaacaggaacgggtaaaacgttagcatttgtg
ttaccaattttagaaaaaatcgatccagaatgtagcgatgttcaggctttaattgttgca
ccaacaagggaactagcactgcaaattacaactgaaattaaaaaaatgcttgtgcaaaga
gaagatattaatgtattagcgatttatggcggtcaagatgtagcacagcaattgagaaaa
ttaaaaggaaatacacatatagttgttgcgacaccaggacgattattagatcatatacga
cgtgaaacgattgatttaagtaatctttcaacgattgtactagatgaagcggatcaaatg
ctttatttcggtttcttatatgatattgaagatattttagatgagacacctgatagtaaa
caaacgatgttattctcagcaacgatgccaaaagatattaaaaaattggcgaagcgttat
atggatgagccacaaatgattcaagtacaaagtgaagaagtaacggtaaatacaattgag
cagcgtgtcattgagacgacagatcgtgcaaagccagacgcacttcgttttgttatggac
cgtgatcagccatttttagcagttattttctgtcgtacaaaggttagagcaagtaagttg
tatgataatttaaaaggactaggttataattgtgctgaacttcatggtgatatacctcaa
gcgaaacgtgaaagagttatgaagagtttccgcgaagcaaaaattcagtacttaatcgca
acggatgtagcagctcgtggacttgatgtagatggtgtaacgcacgtatttaactatgat
atccctgaagatgtagaaagttatattcaccgcattggccggacaggacgtgcaggtgga
tcaggtcttgcaattacgttcgttgcagcgaaagatgaaaaacatttagaagaaattgaa
aaaacgcttggtgcaccaatacaaagagaaataatcgaacaaccgaagataaaacgtgta
gatgaaaatggaaaaccggtaccaaggccggctccgaagaaatcaggcgagtatcgtcaa
agagatagccgtgaaggttcaagaagtgattcaagacgtggttcgagaaatggctcaaga
agtgattcaagaaatagttcaagaaatgaaaacaaccgatcatttaataagccaagtaat
aaaaaaggtagtacaaagcaaggtcagcaaagacgtggccgttaa
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