Bacillus paranthracis: NLJ82_13245
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Entry
NLJ82_13245 CDS
T08534
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bpan
Bacillus paranthracis
Pathway
bpan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLJ82_13245 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpan03019
]
NLJ82_13245 (recQ)
03400 DNA repair and recombination proteins [BR:
bpan03400
]
NLJ82_13245 (recQ)
Enzymes [BR:
bpan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NLJ82_13245 (recQ)
Messenger RNA biogenesis [BR:
bpan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NLJ82_13245 (recQ)
DNA repair and recombination proteins [BR:
bpan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NLJ82_13245 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_7
HTH_10
A-ATP_synth_H_N
HTH_38
HTH_45
HEM4
HTH_23
Sigma70_r4
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UTO11183
LinkDB
All DBs
Position
complement(2574975..2577092)
Genome browser
AA seq
705 aa
AA seq
DB search
MFTKAQELLASYFGYSSFRRGQDETIKNVLDGKDTVCIMPTGGGKSICYQIPALVFEGTT
LVISPLISLMKDQVDTLVQNGISATYINSSISITEANQRIQLAKQGHYKLLYVAPERLDS
MEFVDQLIDMKIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQ
VRDDICNTLGINQENTIMTTFERENLSFSVIKGQDRNAYLADYIRQNQKESGIIYAATRK
VVDQLYEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRY
VIHYQLPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK
LQNMTDYCHTEQCLQSFILQYFGEEPKEDCGRCGNCTDDRESIDVTRESQMVLSCMIRTN
QRFGKQMIAQVLTGSKNKKVIEFNFHTLPTYGLLSNRSVKEVSEFIEFLISDELIAVEHG
TYPTLKVTEKGKEVLLGKENVLRKERVETRQIVQDHPLFEVLREVRKEIAQGEGVPPFVI
FSDQTLKDMCAKMPQSDSELLTVKGIGEHKLVKYGSHFLQAVQHFIEENPNYAETIKTEV
VTERKKSGKASANSHLETYEMYKQGINLDEIAKERGLSRQTIENHLIRCFEDGMEVDWNS
FVPAEYEQLIETAVQNADGGLKSIKEQLPNEVSYFMIRAYLQIRK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgtttacaaaagcacaagaacttttagcgtcttatttcggttattcgtcattccgaaga
ggacaagatgaaacaattaaaaatgtattagatgggaaagatactgtctgtattatgcct
acaggtggtggtaagtcaatttgttatcaaattcccgcattagtatttgaaggaacaacg
ttagttatatcgcctttaatatcacttatgaaagaccaagtagatacattagtacaaaat
ggtatttcagctacatatattaatagttctatttcgattacagaagcgaatcaacgaatt
caattagcgaaacagggccattataagttactttatgtagcgccagagcgacttgattca
atggagtttgttgaccaactgatcgatatgaaaatcccgatgattgccattgatgaggcg
cactgtatttcgcagtggggacatgatttccgtccgagttatttacatatacaccgtata
ttagattatcttccagaaaagccgcttgtattagcattaactgctacggcaacaccacaa
gttcgtgatgatatttgcaacacgcttggaattaatcaagaaaacacgattatgacaacg
tttgagcgcgagaacttatcattttctgttattaaaggacaagatcgtaatgcatattta
gcggattatattcgtcaaaatcaaaaggaatctgggattatatatgcagctactagaaaa
gtagttgatcagttgtatgaggatttaatgaaagcgggagtttctgtatcaaaatatcat
gccggtatgagtgataacgatcgaaatgagcaacaagaactctttttacgtgatgaagta
agtgtaatggtagccacatctgcgtttgggatgggtattgataaatcgaatattcgttac
gttatccattatcaacttccaaaaaatatggaaagttattaccaagaagcaggacgtgct
ggccgtgacggattagatagtgcatgtatattgctttattcttctcaagatgtacaagta
caacgctttttaattgatcaatcgacaggagagtctcgtttttcaaatgaacttgaaaaa
ctgcaaaatatgactgactactgtcatacagaacaatgtttacaatcatttattttgcaa
tactttggagaagaaccgaaagaagattgtggccgctgcggtaattgtacagacgaccga
gaaagtatcgatgtgacgagagaatcgcaaatggttttatcttgtatgattaggacgaac
caacgatttggtaaacaaatgattgcacaagtgctaactggatctaaaaataagaaagtc
attgaatttaattttcatactttgccaacttacggacttttatcaaatcgtagtgtaaaa
gaagtgagtgaatttattgagtttttaatttcagacgagctaattgcagttgaacatggt
acttacccgacactaaaagtaacggaaaaagggaaagaggtgttacttggtaaagagaat
gttttacgtaaagaacgagtagagacaagacaaatcgttcaagatcatcctttatttgaa
gtacttcgcgaagtacgtaaagaaattgcgcaaggagaaggggtacctccattcgttatt
ttctctgaccaaacgttgaaagatatgtgcgcaaaaatgccgcaaagcgattctgaactt
ttaactgtgaaagggattggtgaacacaagcttgtgaagtatggttcgcacttcttacaa
gcagttcagcactttattgaggaaaacccaaactatgctgaaactattaaaacagaagtg
gtgacagaacggaagaaatcagggaaagcttcagcaaattctcatttggaaacgtatgaa
atgtataaacaaggtattaatctagatgaaattgcgaaagaacgtggattatcaagacaa
acgattgaaaatcatttaattcgttgttttgaagatggaatggaagtagactggaacagt
tttgttcctgcagaatacgaacaactgattgaaactgctgtgcaaaatgctgatggtggt
ctgaaatcgattaaggaacaacttccgaatgaagtgagttactttatgattcgtgcttat
ttacaaattagaaagtag
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