KEGG   Candidatus Bealeia paramacronuclearis: Bealeia1_00502
Entry
Bealeia1_00502    CDS       T11821                                 
Name
(GenBank) Transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bpao  Candidatus Bealeia paramacronuclearis
Pathway
bpao03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bealeia1_00502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpao03021]
    Bealeia1_00502
   03019 Messenger RNA biogenesis [BR:bpao03019]
    Bealeia1_00502
Transcription machinery [BR:bpao03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Bealeia1_00502
Messenger RNA biogenesis [BR:bpao03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Bealeia1_00502
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Fungal_virus_P2_C AAA AAA_25 OB_RNB AAA_22 ATPase_2 NACHT S1CSD-TOTE-2 ResIII AAA_30 DnaB_C Spore_III_AA
Other DBs
NCBI-ProteinID: WVX66326
UniProt: A0ABZ2C2D2
LinkDB
Position
502528..503793
AA seq 421 aa
MESLNLHDLKRKSPSELLVFAEELAVENTSTLRKQEIMFAILKKLAERDIPIFAEGVVEV
LQDGFAFLRSTESNYLAGPDDIYVSPSQVRKFGLRTGDTVDGEIRGPKDGERYFALLKVN
KVNGDDPEQLRHRINFDNLTPLFPTEKLKLEYEDPTIKDLIPRVIELVSPLGKGQRALIV
APPRTGKTMMMQSITNAIAKNHPEVIVMVLLIDERPEEVTDMSRSVKGEVISSTFDEPAS
RHVQVAEMVIEKAKRLVEQKRDVVIFLDSITRLARAYNTVVPSSGKVLTGGVDANALQRP
KRILGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSEIILDRKLSDKRTFPA
IDITKSGTRKEELLVSPEVLSKMWILRRVLMPMGVVDGMEFLLDKLRTTKTNNDFFDSMN
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggaatcattgaatttacacgatctgaaacggaaatctccttctgaactcctcgtcttt
gctgaggaacttgcagttgaaaacacaagcacattgcgcaaacaagaaatcatgtttgcc
attttgaaaaaattggctgagcgtgacatcccgatttttgcagaaggtgtggttgaggtt
cttcaagatggatttgcctttttaagatcgacagaatccaattatttagcgggacctgat
gatatttatgtttccccgagccaagttcgtaagtttgggcttcgcactggagatacggtg
gatggtgaaattcgtggacctaaggatggcgagcgttattttgcactcttgaaggtcaat
aaagttaatggtgacgatcctgaacaattgcgtcatcgtatcaattttgataacctcacc
cccctttttcctactgaaaaactcaaattagaatatgaagatccaaccattaaagatctt
atcccccgagttattgaattggtttcgcctttaggaaaagggcagcgcgctttaatcgtg
gcccctccccggactggtaagactatgatgatgcaatcgatcaccaatgctattgccaaa
aatcatcctgaagttattgtaatggttcttttgattgatgagcgccctgaagaagtgacg
gatatgtcccgctccgttaaaggagaggtcattagctcaacattcgatgagcctgcaagc
cgacacgttcaagtcgctgaaatggttattgaaaaagctaaacgtttggtagagcaaaaa
agagatgttgtaatttttcttgactccattacgcgtttggcgcgcgcttacaacactgtt
gttccctcatcgggtaaggttttaacgggtggtgtggacgcgaacgctttgcagcgtcct
aagcgtattttaggggcagcccgcaatattgaagagggggggtctctcacaattattgca
accgcattggtggatacagggtcgcgcatggatgaggttatctttgaggagttcaaagga
accggtaactcagaaattattttggatcggaaactttcggacaaaagaacgtttcctgcg
attgatattacaaaatcaggaacccgtaaggaggagcttttggtctctcctgaagttctt
tcaaaaatgtggatcttgcgtcgtgtcttgatgcctatgggtgttgtggatggaatggaa
tttctccttgataaattacgtactaccaaaactaacaatgacttttttgattctatgaat
tcctga

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