KEGG   Bordetella parapertussis Bpp5: BN117_0205
Entry
BN117_0205        CDS       T02297                                 
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
bpar  Bordetella parapertussis Bpp5
Pathway
bpar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bpar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BN117_0205 (ung)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpar03400]
    BN117_0205 (ung)
Enzymes [BR:bpar01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BN117_0205 (ung)
DNA repair and recombination proteins [BR:bpar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BN117_0205 (ung)
 Prokaryotic type
     BN117_0205 (ung)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: CCJ47538
UniProt: K0M9W8
LinkDB
Position
complement(213226..213978)
AA seq 250 aa
MPNDNRLAPAALAAQAAALPAAWRHVLEQPAVARAFASVLGHVEQRLAEGAVVYPAAPFR
ALDQLAPAQVRVVILGQDPYHGPGQAQGLAFSVPDDCKCPPSLRNIFNEIAVDYPRPTRH
DLSAWTRQGVLLLNTSLTVEDGQPGSHAKRGWETVTDALIAEVARDPSPKVFLLWGAHAQ
AKQALVPADAGHLVLAANHPSPLSARRPPVPFVGCGHFRQTNAWLQQHGKKPVDWSDEQN
NASRQGEFAL
NT seq 753 nt   +upstreamnt  +downstreamnt
atgccgaacgacaaccgcctcgcccccgccgctctcgccgcccaggcggccgccctgccc
gccgcctggcgccacgtcctggagcaacccgccgtggcgcgcgccttcgcgtccgtcctg
ggacacgtcgaacaacgcctggccgagggcgccgtggtctacccggccgcgccctttcgc
gccctggaccagctcgcccccgcgcaagtacgcgtcgtgatcctgggccaggacccttac
catggccccggccaggcccagggcctggccttttcggtgcccgacgactgcaagtgtccg
cccagcctgcgcaacatcttcaacgaaatcgcggtggactatccgcgcccgacgcgccat
gacctgtcggcctggacacgccagggcgtgctgctgctcaacacgtcgctgacggtggaa
gacggccagcccggctcgcacgccaagcgcggctgggaaaccgtcaccgacgccctgatc
gccgaggtggcgcgcgacccgtcccccaaggtcttcctgctatggggcgcgcatgcgcag
gccaagcaagcgctggtgccggccgacgccgggcacctggtgctggcggccaaccacccg
tcacccctgtcggcgcgccgccctccggtgccttttgtcggctgcgggcatttccgccag
accaatgcgtggttgcaacaacacggcaaaaaaccggtggattggtcggacgagcaaaat
aatgcttcccgtcaaggggaattcgcgttatga

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