Bordetella parapertussis Bpp5: BN117_1037
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Entry
BN117_1037 CDS
T02297
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN117_1037 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpar03019
]
BN117_1037 (pcnB)
Enzymes [BR:
bpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BN117_1037 (pcnB)
Messenger RNA biogenesis [BR:
bpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BN117_1037 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CCJ48370
UniProt:
K0MB39
LinkDB
All DBs
Position
complement(1135344..1136699)
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AA seq
451 aa
AA seq
DB search
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGA
VRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPAS
DDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYYQGVQDLKKRQVRI
IGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLL
TCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFL
FAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQP
RFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEE
TAHLPREAGDAPAQKRRRPRRRPSNRPREPQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgattaccgaaaccataagaaaatttgtcggccggctgttcgcgccggccctgcgcggc
ccacagcgcatcggcgcggaacgccatggcatcgatcgccgcaatgtctcgcgccacgcc
atcaaagtctgcgacgtcctgcgccagcatggctacgaagcctatatcgtcggcggcgcg
gtgcgcgacctgatcgtgggcctggagcccaaggatttcgacgtggccaccaatgccacg
cccgagcagatccggccgctgtttcgccgcgcccgcatcatcggccggcgcttccagctg
gtgcacgtggtgttcggccaggaaatcatcgaaacctcgaccttccgcgcgccggcctcg
gacgaccaggaaaccgacgagcacggccgcatcctgcgcgacaacgtattcggcagccag
gaagaagacgcggcgcgccgcgacttcaccatgaacgcgctgtactacgacccgcacacc
gaggaagtcatcgactactaccagggcgtgcaggacctgaaaaagcgccaggtgcgcatc
atcggcgacccggtcaagcgctatcgcgaagaccccgtgcgcatgctgcgcgcggtgcgc
ttcgccgccaagctgaacggcagcatcgataccgccacgcggcagccgatccgcaccatg
gccagcctgatcgagaacgtgccggcctcgcgcctgttcgacgaaatgctcaagctgctg
acctgcggccacgccatggactgcctgcggcagttgcgcaacgacggcctgcaccacggc
ctgctgcccttgctcgacgtcgtgctcgagcagcccggcggcgagaatttcgtcgaactg
gcgctggagcgcaccgatgcgcgcgtgcgcgccggcaagaccatcagccccagcttcctg
ttcgcggcgctgttgtggcagctggtcgacgtgcgctggaaacagctgcgggcccagggc
gagcacaacatccccgcgctggtgcaggccgccgactcggtgctggacgaacagaccgag
aagctggccatccagcgccgcttctcgtccgacatgcgcgagatctggttcatgcagccg
cgcttcgagcgccgcgccggcaagaccatctaccgcatgctggagcagccgcgctttcgc
gccgcctgcgacttcctgcagctgcgcgccgccgccggcgagttcgacagcgtgctggcc
cagtggtggatggacctggccaatggcgacgatgccacgcgcgccgaaatgatcgaggaa
accgcccacctgccgcgcgaagcgggcgacgcgccggcgcaaaagcgccgccgtccgcgc
cgccgcccgtccaaccgcccgcgcgaaccgcaatga
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