Bordetella parapertussis Bpp5: BN117_1509
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Entry
BN117_1509 CDS
T02297
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADP+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar00250
Alanine, aspartate and glutamate metabolism
bpar00310
Lysine degradation
bpar00350
Tyrosine metabolism
bpar00650
Butanoate metabolism
bpar00760
Nicotinate and nicotinamide metabolism
bpar01100
Metabolic pathways
bpar01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BN117_1509 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BN117_1509 (gabD)
00310 Lysine degradation
BN117_1509 (gabD)
00350 Tyrosine metabolism
BN117_1509 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BN117_1509 (gabD)
Enzymes [BR:
bpar01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BN117_1509 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BN117_1509 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BN117_1509 (gabD)
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
Pectinesterase
Motif
Other DBs
NCBI-ProteinID:
CCJ48842
UniProt:
K0M8P5
LinkDB
All DBs
Position
complement(1638101..1639570)
Genome browser
AA seq
489 aa
AA seq
DB search
MTQLTQPLSRAELLRDACYIDGKWVGAGNGPSIPVDNPSTGKTIISVPKLGRKEAEQAID
AAEAALPAWSARTGKERAAILLKWAQLTMENQQDLAVIMTSEQGKPVAEAAGEIAYAASF
LEWFAEEAKRIDGDILQSPKGGQRLMVLKQPIGVTAAITPWNFPAAMITRKVGPALAAGC
TMVVKPAQQTPLTALALAVLAEQAGVPAGVFQVVTGSSREIGAALCESEVVRKLSFTGST
EVGRTLMEQCAPTIKKLSLELGGNAPFIVFDDADLDRAIDGILASKYRNAGQTCVCANRI
YVQAGVYEEVAKRLVEKVNAMKVGDGFEQGVTQGPLIDTAAVAKVQEHIADATAHGAKVI
AGGQPHALGGSFFQPTVVRDVTQSMRFAVEETFGPVAPLFKFESEDEVIGMANNTIFGLA
AYFYTRDYARIWRVSEALEYGIVGINTGIISNEVGPFGGVKQSGLGREGSKYGIEDYLEL
KYLCVDLGA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagttgacccaacccctgagccgcgccgaactgctgcgcgacgcctgctacatc
gacggcaagtgggtaggcgccggcaacggcccgtccatcccggtcgataacccgtccacc
ggcaagaccatcatctcggtgcccaagctgggccgcaaggaagccgagcaggccatcgac
gccgccgaggccgccctgcccgcctggagcgccaggaccggcaaggagcgcgccgcgatc
ctgctgaagtgggcccagctgacgatggaaaaccagcaggacctggccgtcatcatgacg
tccgagcaaggcaagcccgtagccgaggccgccggcgagatcgcctacgccgcgtccttc
ctggagtggttcgccgaagaagccaagcgcatcgacggcgacatcctgcaaagccccaag
ggcggccagcgcctgatggtgctcaagcagcccatcggcgtgaccgccgccatcacgccg
tggaacttcccggccgccatgatcacccgcaaggtcggcccggccctggccgccggctgc
accatggtggtcaagccggcccagcagacgccgctgaccgcgctggcgctggccgtgctg
gccgagcaggccggcgtgccggccggcgtgttccaggtcgtgaccggcagctcgcgtgaa
atcggcgcggccctgtgcgaaagcgaagtggtacgcaagctgagcttcaccggctcgacc
gaagtcggccgcacgctcatggagcaatgcgcgcccaccatcaagaaactgtcgctggaa
ctgggcggcaacgcgccgttcatcgtgttcgacgacgccgacctggatcgcgccatcgac
ggcatcctggcctccaagtaccgcaacgccggccagacctgcgtatgcgccaaccgcatc
tacgtgcaggccggcgtctacgaggaagtggccaagcgcctggtcgagaaggtcaacgcc
atgaaggtgggcgacggcttcgaacagggcgtcacccagggcccgctgatcgacaccgcc
gccgtggccaaggtgcaggaacacatcgccgacgccaccgcgcacggcgccaaggtcatc
gccggcggccagccgcatgcgctgggcggcagcttcttccagcccacggtggtgcgcgac
gtcacgcagtcgatgcgctttgccgtcgaggaaaccttcggcccggtcgccccgctgttc
aagttcgaaagcgaagacgaagtcatcggcatggccaacaacaccatcttcggcctggcc
gcctacttctacacgcgcgactacgcccggatctggcgcgtctccgaagcgctggaatac
ggcatcgtcggcatcaacaccggcatcatctccaatgaagtcggcccgttcggcggcgtc
aagcaatccggcctgggccgcgaaggctcgaagtacgggatcgaggactacctcgagctg
aaatacctctgcgtggacctgggcgcctga
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