Bordetella parapertussis Bpp5: BN117_1513
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Entry
BN117_1513 CDS
T02297
Name
(GenBank) probable ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar03420
Nucleotide excision repair
bpar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN117_1513
03430 Mismatch repair
BN117_1513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpar03400
]
BN117_1513
Enzymes [BR:
bpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN117_1513
DNA repair and recombination proteins [BR:
bpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN117_1513
MMR (mismatch excision repair)
Other MMR factors
BN117_1513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
HHH
DUF7158
Motif
Other DBs
NCBI-ProteinID:
CCJ48846
UniProt:
K0MGF2
LinkDB
All DBs
Position
1643525..1645618
Genome browser
AA seq
697 aa
AA seq
DB search
MSEPASRAPAPADDPLAELNPAQREAAAYGVDAPASQALLVIAGAGSGKTNTLAHRVAHL
ILHGADPQRMLLLTFSRRAAQEMERRVGGVLQRVMGLRAGHAAPALPWAGTFHSVGARLL
RDCAPRIGLSEAFTVHDRGDAEDLMGIVRHELGLSATHNRFPLKGTCLAIYSRVVNSQAP
LAEVLRQAFPWCEAWEAELKRLFQAYVLAKQEQNVLDYDDLLLYWAEMMRDAGLAADVGA
RFDHILVDEYQDTNRLQAAILLAMKPDGGGLTVVGDDAQSIYSFRAASVRNILDFPQQFP
GGAKVVTLERNYRSTQPILDASNAVIGLAAERYAKALWTDRASSQRPELVSVSDEAGQAR
WVADQVLAQREGGATLKSQAALFRASSHSAALELELTRRNIPFVKFGGLRFLEAAHLKDM
LSVLRWAENPRSRLAGFRVAQLVPGIGPATAGKLMDAMAQAADPLAAMREFQPGAAARQQ
WSEFVATYATLREARRPWPADVDAALQWYGPQLERIFDDARVRRADLEQLARLAGGYPTR
ERFLTELTLDPPDATSDESGPPLRDEDYMILSTIHSAKGQEWKSVYILNAVDGCMPSDMA
TGTAEEIEEERRLLYVAMTRARERLQVVVPQRFYVHQQTGLGDRHVYGSRTRFISEAMLP
LFEHLPKPPELPFDRARAIEPAAPRIDVASRVRGLFS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacctgcttcccgcgccccggcgcccgccgatgatcccctggccgaactgaac
cccgcgcagcgcgaggccgccgcgtacggggtcgatgcgccggccagccaggcgctgctg
gtgatcgccggggccgggtcgggcaagaccaatacgctggcgcaccgcgtggcgcacctg
atcctgcatggcgccgatccgcagcgcatgctgctgttgacgttctcgcgccgcgccgcg
caggaaatggaacggcgcgtgggcggcgtgctgcagcgcgtgatgggcctgcgcgccggg
cacgcggcgcctgcgttgccgtgggccggcacgttccacagcgtgggcgcgcggctgctg
cgcgattgcgcgccgcgcatcggcctgtcggaggcctttaccgtgcacgatcgcggcgac
gccgaggacttgatgggcatcgtgcgccacgagctggggctgtcggccacccacaaccgc
ttcccgctcaagggcacctgcctggccatttattcgcgcgtggtcaacagccaggcgccg
ctggccgaggtgctgcgccaggcgttcccgtggtgcgaagcctgggaggccgagctcaag
cgcctgttccaggcctatgtgctggccaagcaggagcagaacgtgctcgattacgacgac
ctgctgctgtactgggccgagatgatgcgcgacgcggggctggccgccgatgtcggcgcg
cgcttcgaccatatcctggtcgacgagtaccaggacaccaaccgcctgcaggccgccatc
ctgctggccatgaagcccgacggcggcggcctgaccgtggtgggcgacgacgcgcagtcg
atctattcgttccgcgccgcgagcgtgcgcaacatcctcgatttcccgcagcagtttccc
ggcggcgccaaggtggtcacgctggagcgcaattaccgctccacccagcccatcctggat
gcgtccaacgcggtcatcgggctggccgccgaacgctacgccaaagcgctgtggaccgat
cgcgcctcgtcgcagcgccccgagctggtgagcgtcagcgacgaagccggccaggcgcgc
tgggtggccgaccaggtgctggcgcagcgcgagggcggggccacgctcaagtcgcaggcg
gcgctgtttcgcgcctccagccacagcgccgcgctggagctcgaactgacccggcgcaac
atcccgttcgtgaaattcggcggcctgcgctttctcgaggccgcccatctcaaggacatg
ctgtccgtgctgcgctgggccgagaacccgcgctcgcggctggccggtttccgggtggcg
cagctggtgcccggcatcggcccggccaccgccggcaagctgatggacgccatggcgcag
gcggccgatccgctggcggccatgcgcgagttccagccgggcgcggcggcgcgccagcag
tggagcgaattcgtcgccacctacgcgacgctgcgcgaggcgcgccggccctggcccgcc
gacgtggatgccgcgctgcaatggtacgggccgcaactggagcgcatcttcgacgacgcg
cgcgtgcgccgcgccgacctggagcagctggcccggctggccggcggctatccgacgcgc
gaacgcttcctcaccgagctgacgctggacccgcccgacgcgaccagcgacgagtccggt
ccgccgctgcgcgacgaagactatatgatcctgtccaccattcactcggccaagggccag
gagtggaagtcggtctacatcctgaacgcggtcgacggctgcatgccctcggacatggcc
accggcacggccgaggagatcgaggaagagcggcgcctgctgtacgtggcgatgacgcgc
gcgcgcgagcggctgcaggtggtggtgccgcagcgcttctacgtgcaccagcagaccggg
ctgggcgaccgccacgtctacggctcgcgcacccgcttcatttccgaggccatgctgccg
ctgttcgagcacctgcccaagccgcccgagctgccgttcgaccgcgcccgcgccatcgag
ccggccgcgccgcgcatcgacgtggccagccgggtgcgcgggctgttctcgtag
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