Bordetella parapertussis Bpp5: BN117_1554
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Entry
BN117_1554 CDS
T02297
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar03030
DNA replication
bpar03430
Mismatch repair
bpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN117_1554
03430 Mismatch repair
BN117_1554
03440 Homologous recombination
BN117_1554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpar03032
]
BN117_1554
03400 DNA repair and recombination proteins [BR:
bpar03400
]
BN117_1554
Enzymes [BR:
bpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN117_1554
DNA replication proteins [BR:
bpar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN117_1554
DNA repair and recombination proteins [BR:
bpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN117_1554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CCJ48887
UniProt:
K0M8Q4
LinkDB
All DBs
Position
1690963..1691706
Genome browser
AA seq
247 aa
AA seq
DB search
MPQMSYILYKTCLAAHRGLSRRRMPVGPAGRCFYCCFGINMAYFRRYTTPHPYGQTLRAG
AAAGRASAARDGLRALDGPFVVADLETTGLSVATCEILEFAAVRVSACGQIEREFTQVVR
TDGRVPPFISRLTGITQAEVERDGVPVRQAFGDFLDFIEGGPLFFHNASFDRRFLQAAAD
RTGLPFEAQTRCTLMLARQAWPELPSHKLNVLARHLGASEPTHRALADVRTTVAVALAAR
ARLAAQG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaatgtcttatatcttatataagacttgcctggcagcacatcggggcctatcc
cggcgtagaatgcccgttggacccgcagggcgttgtttttattgttgtttcggtatcaat
atggcctatttccgtcgctacaccacgccccatccctatgggcagaccctgcgcgctggc
gccgcggccggccgcgccagcgccgcgcgcgacggcttgcgggcgctggatgggccgttc
gtggtggccgacctggaaaccaccgggctgtccgttgccacgtgcgaaatcctcgaattc
gccgccgtgcgcgtcagcgcatgcgggcagatcgagcgcgagttcacccaggtggtgcgc
accgacggcagggtgccgccgttcatttcgcgcctgaccggcatcacccaggccgaagtc
gagcgcgatggcgtgccggtgcggcaggcgttcggcgatttcctcgacttcatcgagggc
gggccgctgtttttccataacgcttcgttcgatcgccgcttcctgcaggccgcggccgat
cgcaccggcctgccgttcgaggcgcagacccgttgcacgctgatgctggcgcgccaggcc
tggcccgagctgccgtcgcacaagctgaacgtgctggcccgccatctcggcgcgtccgag
ccgacccaccgggccctggccgacgtgcgcaccaccgtggccgtggcgttggctgcgcgt
gcgcggctggcggcgcagggctga
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integrated database retrieval system
