Bordetella parapertussis Bpp5: BN117_1829
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Entry
BN117_1829 CDS
T02297
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BN117_1829 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpar03016
]
BN117_1829 (trmU)
Enzymes [BR:
bpar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
BN117_1829 (trmU)
Transfer RNA biogenesis [BR:
bpar03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BN117_1829 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
ThiI
NAD_synthase
QueC
Arginosuc_synth
Asn_synthase
DUF7411
Motif
Other DBs
NCBI-ProteinID:
CCJ49162
UniProt:
K0MEJ3
LinkDB
All DBs
Position
2005398..2006513
Genome browser
AA seq
371 aa
AA seq
DB search
MPSNLTRKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTRQDLLD
AASVADLVGVEFEYVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMA
LGAEHIATGHYARVRTVETPAGPRHQLLKALDDTKDQSYFLHRLNQVQLARTLFPLGELR
KTEVRRIAHEIGLHNAAKKDSTGICFIGERPFREFLNRYLPSEPGPILTPEGQRVGTHHG
LSFYTLGQRKGLGVGGVKGRQRDDGTAEAWYAARKDLARNVLYVVQGHDHPWLLSAQLQA
QDASWIAGEPPAAGAYGAKTRYRQADAACRLDQAGGERFALAFEQAQWAVTPGQSAVLYD
GEVCLGGGIII
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaatcttacccgcaaaggccgcgttgtcgtcggcatgtcgggcggcgtcgac
tcatcggtgaccgcctggctgctcaagcagcagggctatgaggtcgtcggcctgttcatg
aagaactgggaagacgacgacgattccgaatactgctcgacgcgccaggacctgctggac
gcggccagcgtcgccgacctggtcggcgtcgagttcgaatacgtcaattttgccgccgaa
tacaaggaccgggtgttcgccgagttcctgcgcgagtactcggccggccgcacgcccaat
cccgacgtgctgtgcaacgccgagatcaagttcaaggccttcctggaccacgccatggcg
ctgggcgccgagcatatcgccaccgggcactatgcccgggtgcgcaccgtcgagacgccg
gccgggccgcgccaccagttgctcaaggccctggacgacaccaaggaccagagctatttc
ctgcatcgcctcaaccaggtgcagctggcgcgcaccctgtttccgctgggtgaactgcgc
aagaccgaggtgcggcgcatcgcccacgagatcgggctgcacaacgcggccaagaaggac
tcgaccggcatctgcttcatcggcgagcggccgttccgcgagttcctcaatcgctacctg
ccgagcgaacccgggcccatcctgacgcccgagggccagcgggtcggcacccaccatggg
ttgtcgttctatacgctgggccagcgcaagggactgggcgtgggcggggtcaaggggcgc
cagcgcgacgacggcacggccgaggcctggtacgcggcgcgcaaggacctggcgcgcaac
gtgctgtacgtcgtgcaggggcacgaccatccatggctgctgtcggcgcagctgcaggcg
caggacgcgagctggatcgccggcgagccgcccgcggccggcgcctacggcgccaagacg
cgctatcgccaggccgatgcggcatgccggctggaccaggcgggcggcgagcgcttcgcg
ctggcattcgagcaggcccaatgggcggtcacgccggggcagtcggccgtgctgtacgac
ggcgaggtctgcctcgggggcggcatcatcatctga
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integrated database retrieval system
