Bordetella parapertussis Bpp5: BN117_2058
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Entry
BN117_2058 CDS
T02297
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar03420
Nucleotide excision repair
bpar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN117_2058 (uvrD)
03430 Mismatch repair
BN117_2058 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpar03400
]
BN117_2058 (uvrD)
Enzymes [BR:
bpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN117_2058 (uvrD)
DNA repair and recombination proteins [BR:
bpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN117_2058 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BN117_2058 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CCJ49391
LinkDB
All DBs
Position
2242270..2244570
Genome browser
AA seq
766 aa
AA seq
DB search
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFALLAVTFTN
KAAREMLTRMSTLLPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQAFQILDTTDQLAAIK
RLLKAGNIDDEKYPPRDVQRFINGAKEEGLRPGDVEAYDPHRRKLIEIYQLYEAQCQREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGTGAAIFA
VGDDDQSIYAFRGANVGNMADFERDYAHGRVIRLEQNYRSYGHILDSANALIGHNTGRLG
KNLWTEQGEGEPVRVIEQPSDGMEAQWLVDEIRALINDGRMRSEIAVLYRSNAQSRVLEH
ALFSVGIPYKVYGGLRFFERQEIKHALAYLRLIANPNDDTSWMRVVNFPTRGIGARTLEQ
LSDAARAHDTSLFGAVARVGGKGGSNLAQFAQLIGQMAHDTRELPLPELVDHVIEASGLK
AHYQTEREGAERLENLNELITAATVFAAEENFEGLPAGVVPDHDVSGALMPGVVDAPQPD
TLGGLTPLAAFLSHAALEAGDNQAQVGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHE
NSIMEPAGLEEERRLMYVAITRARERLYLSLAQSRMLHGQTRYAMRSRFLEEIPEQHLKW
LSPRAGLHQGGGFGGAAPAWSSRGDAFGRKPTGTAAPRQPRGMASGVTVGEQQFRVGQGV
RHARFGDGTIIGLSGSGQDAQAQIQFRDVGAKTLALGIAKLDIITA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggaaaagctcaatcctgaacaacgcgctgcagtaacgctcgaaccgcaacac
gccctggttctcgccggggcgggcagcggcaagacccgcgtactgacgacccggatggcc
tggctgattcaaaccggccaggccagtccatttgcgctgttggcagtcacctttaccaac
aaggcggcgcgtgaaatgctcacgcgcatgtcgaccctgttgccgatcgacacgcgtggc
ctgtggatcggtaccttccacggcctgtgcaaccgcatgctgcgcgcgcatcatcgcgac
gcgggcttgccgcaggcattccagattctcgataccaccgaccagctggccgccatcaag
cgcctgctcaaggcgggcaatatcgacgacgagaagtacccgccacgcgatgtgcagcgt
ttcatcaacggcgccaaggaagaggggctgcgtcccggcgacgtcgaggcctacgatccg
caccggcgcaagttgatcgagatctaccagctgtacgaggcgcagtgccagcgcgagggc
gtggtcgatttcgccgagctgctgctgcgcgcgtacgagctgctgtcgcgcaacgcgccg
gtgcgcgaacattaccagcggcgcttccgccatatcctggtcgatgagttccaggacaca
aacacgctgcagtacaagtggctgcgtctgctggcaggcaccggggcggcgattttcgcg
gtcggcgacgacgatcagtccatctatgcgtttcgcggcgccaacgtcggcaacatggcc
gacttcgaacgcgattacgcacatggccgtgtcatccgcctggaacagaactaccgctcg
tacggccacatcctggattcggccaatgccctcatcgggcacaacaccggacgcctgggc
aagaacctctggaccgaacagggcgagggcgagccggtgcgcgtcatcgagcagccctcc
gacggcatggaggcgcaatggctggtcgacgagatccgcgcgttgatcaacgacggccgc
atgcgcagcgaaatcgccgtgctctaccgcagcaacgcgcaatcgcgcgtgctcgagcat
gcgctgttctcggtgggcatcccctacaaggtgtacggtggcctgcgcttcttcgagcgc
caggaaatcaagcacgcgctggcctatctgcgcctgatcgccaatccgaacgacgacacc
tcctggatgcgggtggtcaactttccgacccgcggcatcggggcgcgcacgctcgagcag
ctcagcgacgcggcgcgcgcgcacgacaccagcctgttcggcgcggtggcccgcgtcggc
ggcaagggcggctcgaatctggcgcaattcgcgcagctgatcggacagatggcgcacgac
acgcgcgagctgccgctgcccgaactggtggaccatgtcatcgaggccagcggcctgaag
gcccactaccagaccgaacgcgaaggcgccgagcgcctggagaacctcaacgaactgatc
accgctgccacggtgttcgcggccgaggaaaacttcgaaggcttgccggccggcgtcgtg
cccgatcacgatgtgagcggcgccctgatgccgggcgtcgtcgatgccccgcaacccgat
acgctgggcggcctgacaccgttggcggctttcctgtcgcatgcggcgctggaagccggc
gacaatcaggcgcaggtgggccaggacgcggtgcagctgatgaccgtgcacgccgccaag
ggccttgagttcgacgccgtgttcatcaccggcttggaggaagggctgttcccgcacgag
aacagcatcatggagcccgccggcctcgaggaagagcggcgcctgatgtacgtggcgatc
acccgggcccgggaaaggctgtatctcagcctggcgcaaagccgcatgctgcacggccag
acgcgttacgccatgcgttcgcgttttctcgaagaaattcccgagcagcatctgaagtgg
ctgagcccgcgcgccggcctgcatcagggcggcggcttcggcggcgcggcgccggcctgg
agcagtcgcggcgacgcctttggccgcaagcctaccggcactgccgcacctcggcagccg
cgtggcatggccagcggcgtcaccgtgggcgagcagcagttccgggtggggcagggcgtg
cgccacgcgcgctttggcgacggcaccatcataggcctcagcggttcggggcaggacgcc
caggcccagatccagtttcgcgacgtgggcgccaagacgctggcgctgggcatcgccaag
ctggacatcatcacggcctga
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integrated database retrieval system
