Bordetella parapertussis Bpp5: BN117_2605
Help
Entry
BN117_2605 CDS
T02297
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar02020
Two-component system
bpar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN117_2605 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN117_2605 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpar03021
]
BN117_2605 (rpoN)
Transcription machinery [BR:
bpar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN117_2605 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF3208
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CCJ49938
UniProt:
K0MET2
LinkDB
All DBs
Position
2792297..2793745
Genome browser
AA seq
482 aa
AA seq
DB search
MFPRPGASLSEENLSHVLQDLRLRQQTTLAPRLQQSIHLLQMSALEFTTTVQQALATNPF
LEDADETEAQDDAPAPPAASEPPATSEPPPEPPSYAGDYPTRSAAAQPGVASDAAAWVPA
TLSLHERLSQALGAYVLSERDRALAEFIVDGLDDDGYLRQELAQLAGVADFDPPPDASEW
QAALHLVQQLDAPGLAARDLPECLALQIRACSRLDPAVRDAALAIVAAHLPRLARSDYPG
MRRALRCSEPVLRQACGVIRGLDPKPGRRYAHEPPSYVVPDVVVSKQRQQWLVVPNRGAM
PHARLHQAYADLFRRARMDERSPMAQELQEARWLVRNVEQRYATIRRVAEAIVQRQQMFF
EFGQIALRPLMLREVADELEMHESTVSRATANKYMSTPRGVFEFRHFFSRELSTESGGTC
SAAAVRALIREYIDAEDPRMPLSDVTLAERLAGDGIVVARRTVSKYRLQLRLPAADARRQ
YY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgcccaggcgcgtccctgtcggaggaaaacttgagccacgtcctgcaggat
ctgcggctgcgccagcaaaccacgctggcgccacgcctgcagcagtccattcatctgctg
caaatgtcggcgctggagttcaccacgacggtgcagcaggccctggcgaccaatccgttc
ctggaggacgccgacgagaccgaagcgcaggacgacgcgccggcgccgcccgcggcgtcc
gagccgcccgcgacatccgagccgccgcccgagccgccctcctatgccggcgactatccc
acgcgcagcgccgccgcccagcctggcgtggccagcgacgcggcggcctgggtgccggcc
accctgagcctgcacgaacgcctgtcgcaggcgctgggcgcctatgtgctgagcgaacgc
gaccgtgcgctggccgagttcatcgtggatggactggatgacgacggctacctgcggcag
gaattggcccaattggccggcgtcgccgatttcgacccgccgcccgacgccagcgaatgg
caggcggcgctgcacctggtccagcaactcgatgcgccgggcctggccgcgcgcgacctg
cccgaatgcctggccctgcagatccgcgcctgtagccggctcgatccggccgtgcgcgac
gccgccctggccatcgtcgccgcccacctgccgcgcctggcgcgcagcgattaccccggc
atgcggcgcgcgctgcgctgcagcgaaccggtgttgcgccaggcgtgcggggtgatccgc
ggcctcgaccccaagcccggccgccgctatgcgcacgaaccgcccagctacgtcgtgccg
gatgtggtggtcagcaaacagcgccagcaatggctggtggtgccgaatcggggcgccatg
ccgcatgcccggctgcaccaggcctatgccgacctgttccggcgcgcccgcatggacgag
cgcagcccgatggcgcaggagctgcaggaagcccgttggctggtgcgcaatgtcgagcaa
cgctacgccaccatccggcgcgtggccgaggccatcgtgcagcgccagcagatgttcttc
gagttcggccagatcgcgctgcggccgctgatgctgcgcgaggtggccgacgagctggag
atgcacgagtccacggtctcgcgcgccaccgccaacaagtacatgtcgacgccgcgcggg
gtgttcgagttccgccattttttctcgcgcgaactgagcaccgaatcgggcggcacgtgt
tcggccgcggccgtgcgcgcgctgatccgcgaatacatcgacgcggaagacccgcgcatg
cccttgtcggatgtgaccctggccgaacggctggccggcgacggcatcgtggtggcgcgc
cgcacggtgtccaagtaccggctgcagctgcgcctgcccgccgccgacgcgcgccgccag
tactactga
DBGET
integrated database retrieval system
