KEGG   Bordetella parapertussis Bpp5: BN117_2823
Entry
BN117_2823        CDS       T02297                                 
Name
(GenBank) putative DNA polymerase III alpha chain
  KO
K14162  error-prone DNA polymerase [EC:2.7.7.7]
Organism
bpar  Bordetella parapertussis Bpp5
Brite
KEGG Orthology (KO) [BR:bpar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpar03400]
    BN117_2823
Enzymes [BR:bpar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BN117_2823
DNA repair and recombination proteins [BR:bpar03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    BN117_2823
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon HROB
Other DBs
NCBI-ProteinID: CCJ50156
UniProt: K0MJQ8
LinkDB
Position
3044550..3047708
AA seq 1052 aa
MSAILPGYAELHCQSNFSFLQGASHPEELVTRAGELGYAALALTDECSLAGVVRAHVEAR
EQKLPLIIGSSFTLQAGADAPPLDLTLLAQNREGYGNLAELITLGRGRAAKGQYLLTPAD
IEAPAGDNAHLRGMPDCLAILAPPPGLAAERLAEQARWLAAQCPGRAWIGLTLLHHCRDD
LHRAAVEHAAHASGLPIVALGQAQMHRRSRKPLHDTLAAIRTGRSVGQCGYDLAANAERH
LRSRLRLASLYPAQALAQTLAIARRCTFSLDELQYEYPDEIVPAGHTPASYLRQQTYLGA
RQRFPEGMTPAVAAQVEKELALINELRYEAYFLTVYDIVGYARSQGILCQGRGSAANSAV
CYCLGITAVDPARGNTLFERFISKERNEPPDIDVDFEHQRREEVIQYIYEKYGRQRAALT
AVVISYRPRSVLRDTGRALGVDNGIIDAVARAHQWWDGKKEMLRSLAACGLDPASRVARQ
WAELAETLMGFPRHLSQHPGGFVISRGKLSRLVPIENAAMPGRSVVQWDKDDLDALRLLK
VDVLALGMLSVLRRALALAGQRRGRPLALHEIPPDDDATYDMICAADTIGVFQIESRAQM
SMLPRLRPRQYYDLVVQVAIVRPGPIQGGMVHPYLRRRQGREDITYPGPAVRKALARTLG
VPIFQEQVMQIAVDAAGFTPGEADALRRSMAAWRRKGGVDKFRAQLVGGLLARNYTADFA
QALFRQIEGFGEYGFPESHAASFALLAYASSWLKCHEPEAFLAALLNSQPMGFYAPAQLV
QDARRHGVRVLPADVLYSGWEASLQDAPGAARPAVRLGLNLVKGLREDSARAIEQARVRR
PFADTADMARRAGLPRQALDALAAADALRTLAGHRRLASWQAAASAQSRDLLREAVIVET
ETPALPAPSEGQTVAADYRSVGLTLGRHPLALLRPQLAARNFQTAAVLNTYPNRRLARAC
GIVTVRQRPQTAKGTIFVTLEDETGPINAVVRPELIERQRRELLDATLLGIYGTWQSVDG
VRHLVAQRLVDLSSLLGQLSQDGLAAASRNFH
NT seq 3159 nt   +upstreamnt  +downstreamnt
atgtccgccatcctgcccggctacgccgaactgcattgccaatcgaacttctcgttcctg
cagggcgcctcgcatcccgaggaactggtcacgcgggcgggcgaactcggctacgccgcg
ctggccctgaccgacgaatgttcgctggccggcgtggtgcgcgcccacgtcgaggcgcgc
gaacagaaactgccgctcatcatcggcagcagcttcaccctgcaggccggtgccgacgcg
ccgccgctggacctgaccctgctggcgcagaaccgcgaaggctacggcaacctggccgaa
ctgatcacgctggggcgcggccgcgccgccaagggccagtacctgctgacgccggccgac
atcgaagcgcccgccggcgacaacgcgcatctgcgcggcatgcccgactgcctggccatc
ctggcgccgccgcccggcctggccgccgaacgcctggccgaacaagcgcgctggctggcc
gcgcaatgccccggccgcgcctggatcggcctgaccctgctgcaccattgccgcgacgac
ctgcaccgcgccgccgtcgagcacgccgcccacgccagcggcctgcccatcgtcgcactg
ggccaggcgcagatgcaccgccgttcgcgcaagcccctgcacgacacgctggcggccatc
cgcaccgggcgcagcgtcggccagtgcggctatgacctggccgccaacgccgaacgccac
ctgcgctcgcgcctgcgcctggccagcctctatccggcccaggccctggcccagacgctg
gccatcgcacggcgctgcaccttctcgctggacgaattgcaatacgaataccccgacgaa
atcgtgcccgccggccatacgcccgcctcctacctgcgccagcagacttacctgggcgcc
cggcaacgctttcccgagggcatgacgccggcggtcgccgcccaggtcgaaaaagagctc
gccctgatcaacgaactgcgctacgaggcctatttcctcacggtctacgacatcgtcggc
tacgcccgctcgcaaggcatcctgtgccagggccgcggctcggcggccaactcggcggtc
tgttattgcctgggcatcaccgcggtcgatcccgcgcgcggcaacacgctgttcgagcgc
ttcatcagcaaggagcgcaacgaaccgcccgatatcgacgtcgacttcgaacaccagcgg
cgcgaggaagtcatccagtacatctacgagaaatacggccgccagcgcgccgccctgacc
gccgtggtcatctcgtaccggccgcgcagcgtgctgcgcgataccgggcgcgcgctcggc
gtggacaacggcatcatcgacgccgtggcgcgggcgcaccaatggtgggacggcaagaag
gaaatgctgcgctcgctcgccgcctgcggcctggatccggcctcgcgggtggcgcgccaa
tgggccgagctggccgaaacgctgatgggttttccgcgccacctgtcgcagcatcccggc
ggcttcgtgatctcgcgcggcaagctgtcgcgcctggtgccgatcgaaaacgccgccatg
cccgggcgcagcgtggtgcaatgggacaaggacgatctcgacgcgctgcggctgctgaag
gtggacgtgctggcgctgggcatgctgtcggtgctgcgccgcgcgctggcgctggccggc
cagcggcgtggccggccgctggcgctgcacgagattccgcccgacgacgacgccacctac
gacatgatctgcgcggccgacacgataggcgtgttccagatcgagtcgcgcgcgcagatg
agcatgctgccgcgcctgcggccgcgccaatactacgacctggtggtgcaggtggccatc
gtgcggcccggcccgatccagggcggcatggtgcacccctacctgcggcggcgccagggg
cgcgaagacatcacctaccccgggccggcggtgcgcaaggcgctggcgcgcacgctcggc
gtgccgatcttccaggagcaggtcatgcagatcgcggtcgacgccgccggttttaccccc
ggcgaggccgacgcgctgcgccgctcgatggcggcctggcggcgcaagggcggcgtcgac
aagttccgcgcccagttggtgggcggcctgctggcacgcaactatacggccgacttcgcg
caggccctgtttcgccagatcgaaggctttggcgaatacggttttcccgaaagccatgcc
gccagcttcgcgctgctggcctatgccagctcctggctcaaatgccatgaaccggaggcc
ttcctcgcggccctgctgaattctcagcccatggggttctacgcgccggcccagctggtg
caggacgcccgccgccatggcgtgcgggtgctgccggccgatgtgctgtacagcggctgg
gaggccagcctgcaggacgcgcccggcgcggcgcggcccgccgtgcgcttgggcctgaac
ctggtcaaggggctgcgcgaggacagcgcgcgcgccatcgaacaggcgcgcgtgcgccgg
cccttcgccgataccgccgacatggcgcgccgcgccgggctgccgcgccaggcgctcgac
gcactggccgccgccgatgccttgcgcaccctggccggccatcgccgcctggccagctgg
caagcggccgccagcgcacaaagccgcgacctgctgcgcgaagccgtgatcgtcgaaacc
gaaacgcccgcgctgccggcgccgtccgaaggccagaccgtcgccgccgactaccgcagc
gtcgggctgaccctgggccgccatccgcttgcgctgctgcggccgcaactggccgcgcgc
aatttccagaccgccgcggtcctcaatacctaccccaatcgccggctggcgcgcgcctgc
ggcatcgtcacggtgcgccagcggccgcagaccgccaagggcaccatctttgtcacgctc
gaagacgaaaccggccccatcaatgccgtggtgcgtcccgagctgatcgaacggcagcgc
cgcgaactgctggacgccacgctattgggcatctacggcacctggcagagcgtcgatggc
gtgcgccacctggtggcgcagcgcctggtggacctgagcagcctgctgggccagctcagc
caggacggcctggccgccgccagccgcaacttccactga

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