Bordetella parapertussis Bpp5: BN117_3827
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Entry
BN117_3827 CDS
T02297
Symbol
cpn60
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN117_3827 (cpn60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpar03019
]
BN117_3827 (cpn60)
03110 Chaperones and folding catalysts [BR:
bpar03110
]
BN117_3827 (cpn60)
03029 Mitochondrial biogenesis [BR:
bpar03029
]
BN117_3827 (cpn60)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpar04147
]
BN117_3827 (cpn60)
Enzymes [BR:
bpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BN117_3827 (cpn60)
Messenger RNA biogenesis [BR:
bpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BN117_3827 (cpn60)
Chaperones and folding catalysts [BR:
bpar03110
]
Heat shock proteins
HSP60 / Chaperonin
BN117_3827 (cpn60)
Mitochondrial biogenesis [BR:
bpar03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BN117_3827 (cpn60)
Exosome [BR:
bpar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BN117_3827 (cpn60)
Exosomal proteins of other body fluids (saliva and urine)
BN117_3827 (cpn60)
Exosomal proteins of breast cancer cells
BN117_3827 (cpn60)
Exosomal proteins of colorectal cancer cells
BN117_3827 (cpn60)
Exosomal proteins of bladder cancer cells
BN117_3827 (cpn60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CCJ51160
UniProt:
K0MJS3
LinkDB
All DBs
Position
4116055..4117698
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKQVLFADEARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAVVQEGLKYVAAGFNPIDLKRGI
DKAVAAAVEELKKLSKPVTTSKEIAQVGSISANSDASIGQIIADAMDKVGKEGVITVEDG
KSLENELDVVEGMQFDRGYLSPYFINSPEKQVAALDDPYVLIYDKKVSNIRDLLPVLEQV
AKSSRPLLIIAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTV
ISEETGMSLEKATLQDLGQAKRIEVAKENTTIIDGAGDGKSIEARVKQIRAQIEEATSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL
RAKQAITGLKGDTADQNAGIKLILRAVEEPLRTIVTNAGDEASVVVNTVLNGKGNYGYNA
ATGEYGDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELMEDKPAAAPAMPGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaagcaagttctgtttgccgacgaagcccgcgtgcgcatcgtgcgcggcgtg
aacgtcctcgccaacgccgtcaagaccaccctgggccccaagggtcgcaacgtcgtgctg
gagcgctcgttcggcgccccgacggtgaccaaggacggcgtgtccgtcgccaaggaaatc
gaactgaaggacaagttcgaaaacatcggcgcccagctggtcaaggacgttgcctccaag
acctccgacaacgccggtgacggcaccaccaccgccaccgtgctggcccaggccgtcgtt
caggaaggcctgaagtacgtcgccgccggcttcaacccgatcgacctcaagcgcggcatc
gacaaggccgtggccgccgccgtggaagagctgaagaaactgtccaagccggtcaccacc
agcaaggaaatcgcccaggttggctcgatctcggccaacagcgatgcctcgatcggccag
atcatcgctgacgcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggc
aagtcgctggaaaacgaactggatgtcgtcgaaggcatgcaattcgaccgcggctacctg
tcgccctacttcatcaacagcccggaaaagcaagtcgccgcgctggacgatccgtatgtc
ctgatctacgacaagaaggtcagcaacatccgtgacctgctgcccgtgctggagcaagtc
gccaagtcgagccgtccgctgctgatcatcgccgaagacgtcgaaggcgaagcgctggcc
accctggtcgtgaacaacatccgcggcatcctgaagaccaccgccgtcaaggccccgggc
ttcggcgaccgtcgcaaggccatgctggaagacatcgccatcctgacgggcggcacggtg
atctccgaagaaaccggcatgtcgctggaaaaggccacgctgcaggatctgggccaggcc
aagcgcatcgaagtggccaaggaaaacaccacgatcatcgacggcgccggcgacggcaag
tcgatcgaagcgcgcgtcaagcagatccgcgcccagatcgaggaagccacctcggactac
gaccgcgagaagctgcaagagcgcgtggccaagctggccggcggcgttgccgtgattcgc
gtcggtgctgccaccgaagtcgaaatgaaggaaaagaaggctcgcgtcgaagacgccctg
cacgccacgcgtgccgcggtggaagaaggcgtggttcctggcggtggcgttgcgctgctg
cgcgccaagcaggccatcactggcctgaagggcgacacggctgaccagaacgccggcatc
aagctgatcctgcgcgctgtcgaagagcccctgcgcaccatcgtcaccaacgccggcgac
gaagccagcgtggtggtcaacaccgtgctcaacggcaagggcaactacggctacaacgcc
gcgaccggcgagtacggcgacctggtcgagcaaggcgtgctggacccgaccaaggtcacc
cgcaccgcgctgcagaacgccgcttcggtggccagcctgctgctgacggccgaagccgcc
gtggtcgagctgatggaagacaagcccgctgctgctccggcaatgcccggcggcatgggc
ggcatgggcggcatggacttctaa
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integrated database retrieval system
