Bordetella parapertussis Bpp5: BN117_3889
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Entry
BN117_3889 CDS
T02297
Name
(GenBank) putative membrane-bound lytic murein transglycosylase D precursor
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bpar
Bordetella parapertussis Bpp5
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpar01011
]
BN117_3889
Enzymes [BR:
bpar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BN117_3889
Peptidoglycan biosynthesis and degradation proteins [BR:
bpar01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BN117_3889
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CCJ51222
UniProt:
K0MN01
LinkDB
All DBs
Position
4182203..4183612
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AA seq
469 aa
AA seq
DB search
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRG
FAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVES
AYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGD
WYLALASYNWGEGSVQRAMAKNEAAGLGTDYLSLNMPDETRNYVPKLQAIKNIIANPRKF
AVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLL
PADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVA
AGQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRT
HKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagatttctccgcctcctgctacccctgttcctcgccgtacttgccggctgcgccggc
accgcaaaacagaaccaggccgccggtccctccagcaaccgctacatcgcccaagacacc
tcccgcaccgtcgatctcaccagcccccccagcgacgcctgggaccgcatccgccgcggc
ttcgccatccccaacctgaacaccgacctggcccaggagtggaccgactactacgcgtcg
caccccgagtcggtgcagcgcatggccgagcgggccggcaagtacctgtacttcatcgtc
gacgaaatcaaccgccgcggcctgcccaccgagctggcgctgctgcccttcgtcgaaagt
gcctacaaccccaccgccctgtcgcgctcgcaagcctcgggcctgtggcagttcattccc
accaccggccagcatttcaacctcaagcaggactggtggcgcgacgagcgccgcgacccg
atcgcctcgacctacgccgcgctcgactacctggaaaagctgttcgagatgcagggcgac
tggtacctggcgctggcctcgtacaactggggcgagggctcggtgcaacgcgccatggcc
aagaacgaggcggccggcctgggcaccgactacctgtcgctgaacatgcccgacgagacc
cgcaactacgtgcccaagctgcaggccatcaagaacatcatcgccaacccgcgcaagttc
gcggtggtattgccgccggtcgagaacaccccgtatttcgtcgcggtgcagaagaaccgc
gacatcgacatcgagctggcggccaggctggccgaaatgccgctggacgaattcaaggcg
ctcaaccccgcgttcaaccgtcccctgatccgcggcgagcatgcccccaccctgctgctg
ccggccgaccgggccgaccgcttcaacgccaacctgcagaactacaagggcgacctcagt
tcctggaaggtctaccatacgcgccgcggcgaaagctatgccgccatcgccaagcgcttc
ggcatcagcgaggccaagctgcgcgccagcaacgacatcggctcgaaacggaaggtggcc
gccggccaggcgctgctgatcccgggcgtgcccagcggagacggcgccgccaatatccag
ctggcgtcgctgtcgccgccggtgggcgcgctggacaacgtgggcgaaccgcgcgccgct
gcggcgccgcgcggcaaggcgccggcgcgcgtggccagcgcgcgccccaacgtgcgcacc
cacaaggtcagctcgggcgacaccctgttcggcctggcgcgcaaatacggcacctcggtc
ggtgcgctgcgcgccctgaacaacctcaagggcaacaacctgaagctgggctcgcaattg
cgcatcccgggcaccggcacgcgcggctga
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